RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
CMC1-209ENST00000477739 RHOXF2Q9BQY4 288 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 ZNF609O15014 1411 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 MST1RQ04912 1400 aa11.25□□□□□ -0.61
CMC1-209ENST00000477739 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
CMC1-209ENST00000477739 ACSBG1Q96GR2 724 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 BTG4Q9NY30 223 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 BTBD18B2RXH4 712 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 POLR2DO15514 142 aaKnown RBP11.24□□□□□ -0.61
CMC1-209ENST00000477739 DMTNQ08495 405 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 ATG9AQ7Z3C6 839 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 KRT222Q8N1A0 295 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 NCOA7Q8NI08 942 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 TRIM34Q9BYJ4 488 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 HELLSQ9NRZ9 838 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 COL15A1P39059 1388 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 PRKAB2O43741 272 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 MRPS25P82663 173 aaKnown RBP11.24□□□□□ -0.61
CMC1-209ENST00000477739 NR5A1Q13285 461 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 WWC2Q6AWC2 1192 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 TMCO3Q6UWJ1 677 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 TDRD7Q8NHU6 1098 aaKnown RBP11.24□□□□□ -0.61
CMC1-209ENST00000477739 CTNNA3Q9UI47 895 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 SLC12A7Q9Y666 1083 aa11.24□□□□□ -0.61
CMC1-209ENST00000477739 DHX16O60231 1041 aaKnown RBP11.23□□□□□ -0.61
CMC1-209ENST00000477739 MAGEB6Q8N7X4 407 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 KCNB2Q92953 911 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 SPTLC3Q9NUV7 552 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 KRT40Q6A162 431 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
CMC1-209ENST00000477739 DRC1Q96MC2 740 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 PAXBP1Q9Y5B6 917 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 SLIT3O75094 1523 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 MED1Q15648 1581 aaPredicted RBP11.23□□□□□ -0.61
CMC1-209ENST00000477739 KCTD19Q17RG1 926 aaPredicted RBP11.23□□□□□ -0.61
CMC1-209ENST00000477739 MPHOSPH8Q99549 860 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 NOL10Q9BSC4 688 aaKnown RBP11.23□□□□□ -0.61
CMC1-209ENST00000477739 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
CMC1-209ENST00000477739 CABP5Q9NP86 173 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 CARMIL3Q8ND23 1372 aa11.23□□□□□ -0.61
CMC1-209ENST00000477739 ERICH2A1L162 156 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 ZBTB43O43298 467 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 LMAN1P49257 510 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 GRIN1Q05586 938 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
CMC1-209ENST00000477739 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 DHX40Q8IX18 779 aaKnown RBP11.22□□□□□ -0.61
CMC1-209ENST00000477739 CARD10Q9BWT7 1032 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 BLZF1Q9H2G9 400 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 CYP2D7A0A087X1C5 515 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 CCDC102AQ96A19 550 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 PFKFB2O60825 505 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 WDHD1O75717 1129 aaPredicted RBP11.22□□□□□ -0.61
CMC1-209ENST00000477739 MBD4O95243 580 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 EVCP57679 992 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 MTF1Q14872 753 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 IQCB1Q15051 598 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 SDR42E1Q8WUS8 393 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 PPP1R13BQ96KQ4 1090 aa11.22□□□□□ -0.61
CMC1-209ENST00000477739 ITGA6P23229 1130 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 CASP7P55210 303 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 KIF4BQ2VIQ3 1234 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 ZMYM1Q5SVZ6 1142 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 ARMCX5Q6P1M9 558 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 PSMB7Q99436 277 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.61
CMC1-209ENST00000477739 PCDHA5Q9Y5H7 936 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 ZNF335Q9H4Z2 1342 aaPredicted RBP11.21□□□□□ -0.61
CMC1-209ENST00000477739 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.61
CMC1-209ENST00000477739 MATR3P43243 847 aaKnown RBP eCLIP11.21□□□□□ -0.612e-6■■■■□ 21.1
CMC1-209ENST00000477739 PHKA1P46020 1223 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 PIGBQ92521 554 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 DSCC1Q9BVC3 393 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 GREM2Q9H772 168 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 NFE2L3Q9Y4A8 694 aa11.21□□□□□ -0.61
CMC1-209ENST00000477739 MARF1Q9Y4F3 1742 aaKnown RBP11.21□□□□□ -0.62
CMC1-209ENST00000477739 IRS4O14654 1257 aaPredicted RBP11.21□□□□□ -0.62
CMC1-209ENST00000477739 USP49Q70CQ1 688 aa11.21□□□□□ -0.62
CMC1-209ENST00000477739 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.62
CMC1-209ENST00000477739 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.62
CMC1-209ENST00000477739 CAPZA3Q96KX2 299 aa11.21□□□□□ -0.62
CMC1-209ENST00000477739 OGFRQ9NZT2 677 aa11.21□□□□□ -0.62
CMC1-209ENST00000477739 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.62
CMC1-209ENST00000477739 EXOC5O00471 708 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 CTAGE5O15320 804 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 CASQ1P31415 396 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 ZNF174Q15697 407 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 USPL1Q5W0Q7 1092 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 CCDC102BQ68D86 513 aa11.2□□□□□ -0.62
CMC1-209ENST00000477739 ARGLU1Q9NWB6 273 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms