RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PCDHAC2Q9Y5I4 1007 aa19.47■□□□□ 0.71
VHL-203ENST00000477538 LAMA4Q16363 1823 aa19.46■□□□□ 0.71
VHL-203ENST00000477538 MBD4O95243 580 aa19.46■□□□□ 0.71
VHL-203ENST00000477538 BAG3O95817 575 aa19.46■□□□□ 0.71
VHL-203ENST00000477538 EPS15P42566 896 aa19.46■□□□□ 0.71
VHL-203ENST00000477538 MTMR14Q8NCE2 650 aa19.46■□□□□ 0.71
VHL-203ENST00000477538 ESYT1Q9BSJ8 1104 aa19.46■□□□□ 0.71
VHL-203ENST00000477538 MYH8P13535 1937 aa19.46■□□□□ 0.71
VHL-203ENST00000477538 DDX60LQ5H9U9 1706 aaKnown RBP19.45■□□□□ 0.7
VHL-203ENST00000477538 SPDYE2BA6NHP3 402 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 GPAA1O43292 621 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 SPDYE6P0CI01 402 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 PLCG2P16885 1265 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 PPP4CP60510 307 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 DYNLL1P63167 89 aaKnown RBP19.45■□□□□ 0.7
VHL-203ENST00000477538 KIF4BQ2VIQ3 1234 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 TBC1D10BQ4KMP7 808 aaPredicted RBP19.45■□□□□ 0.7
VHL-203ENST00000477538 APOBEC3HQ6NTF7 200 aaKnown RBP19.45■□□□□ 0.7
VHL-203ENST00000477538 CCDC129Q6ZRS4 1044 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 SAMD7Q7Z3H4 446 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 CERS3Q8IU89 383 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 LCORLQ8N3X6 602 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 RIOK1Q9BRS2 568 aaKnown RBP19.45■□□□□ 0.7
VHL-203ENST00000477538 IL25Q9H293 177 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 ARMT1Q9H993 441 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 HACL1Q9UJ83 578 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 CCDC171Q6TFL3 1326 aa19.45■□□□□ 0.7
VHL-203ENST00000477538 SGSM2O43147 1006 aa19.44■□□□□ 0.7
VHL-203ENST00000477538 EGFRP00533 1210 aa19.44■□□□□ 0.7
VHL-203ENST00000477538 MFAP1P55081 439 aaKnown RBP19.44■□□□□ 0.7
VHL-203ENST00000477538 RBM26Q5T8P6 1007 aaKnown RBP19.44■□□□□ 0.7
VHL-203ENST00000477538 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
VHL-203ENST00000477538 PRMT6Q96LA8 375 aaPredicted RBP19.44■□□□□ 0.7
VHL-203ENST00000477538 ADARB2Q9NS39 739 aaKnown RBP19.44■□□□□ 0.7
VHL-203ENST00000477538 IQCA1LA6NCM1 817 aa19.43■□□□□ 0.7
VHL-203ENST00000477538 C8orf34Q49A92 452 aa19.43■□□□□ 0.7
VHL-203ENST00000477538 SH3RF3Q8TEJ3 882 aaPredicted RBP19.43■□□□□ 0.7
VHL-203ENST00000477538 ZBED3Q96IU2 234 aaPredicted RBP19.43■□□□□ 0.7
VHL-203ENST00000477538 STRBPQ96SI9 672 aaKnown RBP19.43■□□□□ 0.7
VHL-203ENST00000477538 WNT10BO00744 389 aa19.42■□□□□ 0.7
VHL-203ENST00000477538 RHBDL3P58872 404 aa19.42■□□□□ 0.7
VHL-203ENST00000477538 CDC42EP5Q6NZY7 148 aa19.42■□□□□ 0.7
VHL-203ENST00000477538 TRPM4Q8TD43 1214 aa19.42■□□□□ 0.7
VHL-203ENST00000477538 TDRD3Q9H7E2 651 aaKnown RBP19.42■□□□□ 0.7
VHL-203ENST00000477538 USP40Q9NVE5 1235 aa19.42■□□□□ 0.7
VHL-203ENST00000477538 POTECB2RU33 542 aa19.41■□□□□ 0.7
VHL-203ENST00000477538 MYO1BO43795 1136 aa19.41■□□□□ 0.7
VHL-203ENST00000477538 GNAT2P19087 354 aa19.41■□□□□ 0.7
VHL-203ENST00000477538 EPHX2P34913 555 aa19.41■□□□□ 0.7
VHL-203ENST00000477538 NBPF9Q3BBW0 867 aa19.41■□□□□ 0.7
VHL-203ENST00000477538 TEX11Q8IYF3 940 aa19.41■□□□□ 0.7
VHL-203ENST00000477538 CRNKL1Q9BZJ0 848 aaKnown RBP19.41■□□□□ 0.7
VHL-203ENST00000477538 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
VHL-203ENST00000477538 TMOD2Q9NZR1 351 aa19.4■□□□□ 0.7
VHL-203ENST00000477538 CLRN2A0PK11 232 aa19.39■□□□□ 0.69
VHL-203ENST00000477538 PRKAB2O43741 272 aa19.39■□□□□ 0.69
VHL-203ENST00000477538 SPDYE2Q495Y8 402 aa19.39■□□□□ 0.69
VHL-203ENST00000477538 ZNF526Q8TF50 670 aaPredicted RBP19.39■□□□□ 0.69
VHL-203ENST00000477538 TAF1DQ9H5J8 278 aaPredicted RBP19.39■□□□□ 0.69
VHL-203ENST00000477538 ZNF70Q9UC06 446 aaPredicted RBP19.39■□□□□ 0.69
VHL-203ENST00000477538 SIPA1L1O43166 1804 aa19.39■□□□□ 0.69
VHL-203ENST00000477538 HSPD1P10809 573 aaKnown RBP19.38■□□□□ 0.69
VHL-203ENST00000477538 USP5P45974 858 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 HIRAP54198 1017 aaPredicted RBP19.38■□□□□ 0.69
VHL-203ENST00000477538 CACNB3P54284 484 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 VPS53Q5VIR6 699 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 KIAA1211Q6ZU35 1233 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 USP50Q70EL3 339 aaPredicted RBP19.38■□□□□ 0.69
VHL-203ENST00000477538 TGFBRAP1Q8WUH2 860 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 SDR42E1Q8WUS8 393 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 RPAP1Q9BWH6 1393 aaPredicted RBP19.38■□□□□ 0.69
VHL-203ENST00000477538 RRAGCQ9HB90 399 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
VHL-203ENST00000477538 PATL2C9JE40 543 aaKnown RBP19.37■□□□□ 0.69
VHL-203ENST00000477538 WDHD1O75717 1129 aaPredicted RBP19.37■□□□□ 0.69
VHL-203ENST00000477538 REC8O95072 547 aa19.37■□□□□ 0.69
VHL-203ENST00000477538 APPP05067 770 aa19.37■□□□□ 0.69
VHL-203ENST00000477538 VEGFAP15692 232 aaPredicted RBP19.37■□□□□ 0.69
VHL-203ENST00000477538 VEZTQ9HBM0 779 aa19.37■□□□□ 0.69
VHL-203ENST00000477538 ASTN2O75129 1339 aaPredicted RBP19.36■□□□□ 0.69
VHL-203ENST00000477538 GSG1L2A8MUP6 293 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 FOXP2O15409 715 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 EIF5BO60841 1220 aaKnown RBP19.36■□□□□ 0.69
VHL-203ENST00000477538 PTH1RQ03431 593 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 NFIAQ12857 509 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 PICALMQ13492 652 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 PNMA8AQ86V59 439 aaPredicted RBP19.36■□□□□ 0.69
VHL-203ENST00000477538 MAPKAPK5Q8IW41 473 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 DSCC1Q9BVC3 393 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 IDI2Q9BXS1 227 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 LSG1Q9H089 658 aaKnown RBP19.36■□□□□ 0.69
VHL-203ENST00000477538 EPB41L4AQ9HCS5 686 aaPredicted RBP19.36■□□□□ 0.69
VHL-203ENST00000477538 NMRK2Q9NPI5 230 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 ATP8A2Q9NTI2 1148 aa19.36■□□□□ 0.69
VHL-203ENST00000477538 FLT1P17948 1338 aa19.35■□□□□ 0.69
VHL-203ENST00000477538 EAPPQ56P03 285 aaPredicted RBP19.35■□□□□ 0.69
VHL-203ENST00000477538 FKBP1CQ5VVH2 108 aa19.35■□□□□ 0.69
VHL-203ENST00000477538 IFNL3Q8IZI9 196 aa19.35■□□□□ 0.69
VHL-203ENST00000477538 DDRGK1Q96HY6 314 aa19.35■□□□□ 0.69
VHL-203ENST00000477538 NACAP1Q9BZK3 213 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms