RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.93■□□□□ 0.14
TOP3A-205ENST00000477508 TDRD3Q9H7E2 651 aaKnown RBP15.93■□□□□ 0.14
TOP3A-205ENST00000477508 PCDHAC2Q9Y5I4 1007 aa15.93■□□□□ 0.14
TOP3A-205ENST00000477508 AOX1Q06278 1338 aa15.93■□□□□ 0.14
TOP3A-205ENST00000477508 SALL3Q9BXA9 1300 aa15.93■□□□□ 0.14
TOP3A-205ENST00000477508 GPR75-ASB3A0A0A6YYF3 556 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 CLRN2A0PK11 232 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 HSPA6P17066 643 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 APLP1P51693 650 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 PDE1AP54750 535 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 LRRFIP1Q32MZ4 808 aaKnown RBP15.92■□□□□ 0.14
TOP3A-205ENST00000477508 ZSCAN25Q6NSZ9 544 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 CENPQQ7L2Z9 268 aaPredicted RBP15.92■□□□□ 0.14
TOP3A-205ENST00000477508 ANTXR1Q9H6X2 564 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 VEZTQ9HBM0 779 aa15.92■□□□□ 0.14
TOP3A-205ENST00000477508 MAST2Q6P0Q8 1798 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 PLCG2P16885 1265 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 FAM83AQ86UY5 434 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 PI4K2BQ8TCG2 481 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 OTUD7AQ8TE49 926 aaPredicted RBP15.91■□□□□ 0.14
TOP3A-205ENST00000477508 ZNF384Q8TF68 577 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 CCDC136Q96JN2 1154 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 DEFB129Q9H1M3 183 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 USP40Q9NVE5 1235 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 NDUFB9Q9Y6M9 179 aa15.91■□□□□ 0.14
TOP3A-205ENST00000477508 TMEM88BA6NKF7 163 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 ADM5C9JUS6 153 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 TRAF5O00463 557 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 CYP7A1P22680 504 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 NF2P35240 595 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 BTDP43251 543 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 PPP4CP60510 307 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 SLC9C2Q5TAH2 1124 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 TICAM2Q86XR7 235 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 MAGEB6Q8N7X4 407 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 OSBPL3Q9H4L5 887 aa15.9■□□□□ 0.14
TOP3A-205ENST00000477508 DOCK2Q92608 1830 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 TRPM7Q96QT4 1865 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 RASA3Q14644 834 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 SUPT20HL1Q3ZLR7 823 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 TSHZ3Q63HK5 1081 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 KBTBD3Q8NAB2 608 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 HOOK2Q96ED9 719 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 CDCA5Q96FF9 252 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
TOP3A-205ENST00000477508 MYO5AQ9Y4I1 1855 aaKnown RBP15.88■□□□□ 0.13
TOP3A-205ENST00000477508 CELF2O95319 508 aaKnown RBP15.88■□□□□ 0.13
TOP3A-205ENST00000477508 ZFYP08048 801 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-205ENST00000477508 PDE6AP16499 860 aa15.88■□□□□ 0.13
TOP3A-205ENST00000477508 FKBP1BP68106 108 aa15.88■□□□□ 0.13
TOP3A-205ENST00000477508 PLEKHM2Q8IWE5 1019 aa15.88■□□□□ 0.13
TOP3A-205ENST00000477508 EDC3Q96F86 508 aaKnown RBP15.88■□□□□ 0.13
TOP3A-205ENST00000477508 IDI2Q9BXS1 227 aa15.88■□□□□ 0.13
TOP3A-205ENST00000477508 TCP10L2B9ZVM9 353 aa15.87■□□□□ 0.13
TOP3A-205ENST00000477508 ENTPD3O75355 529 aa15.87■□□□□ 0.13
TOP3A-205ENST00000477508 ADD2P35612 726 aa15.87■□□□□ 0.13
TOP3A-205ENST00000477508 UBE3CQ15386 1083 aa15.87■□□□□ 0.13
TOP3A-205ENST00000477508 C2orf69Q8N8R5 385 aa15.87■□□□□ 0.13
TOP3A-205ENST00000477508 FAM151AQ8WW52 585 aa15.87■□□□□ 0.13
TOP3A-205ENST00000477508 RHBDL3P58872 404 aa15.86■□□□□ 0.13
TOP3A-205ENST00000477508 CST9Q5W186 159 aa15.86■□□□□ 0.13
TOP3A-205ENST00000477508 TEX11Q8IYF3 940 aa15.86■□□□□ 0.13
TOP3A-205ENST00000477508 EVI5LQ96CN4 794 aa15.86■□□□□ 0.13
TOP3A-205ENST00000477508 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
TOP3A-205ENST00000477508 PPP4R2Q9NY27 417 aa15.86■□□□□ 0.13
TOP3A-205ENST00000477508 AATFQ9NY61 560 aaKnown RBP eCLIP15.86■□□□□ 0.13
TOP3A-205ENST00000477508 ZNF532Q9HCE3 1301 aa15.86■□□□□ 0.13
TOP3A-205ENST00000477508 TCRBV5S4A2TA0A5A2 114 aa15.85■□□□□ 0.13
TOP3A-205ENST00000477508 PPP1R12BO60237 982 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-205ENST00000477508 WDHD1O75717 1129 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-205ENST00000477508 CACNB3P54284 484 aa15.85■□□□□ 0.13
TOP3A-205ENST00000477508 ADGRA1Q86SQ6 560 aa15.85■□□□□ 0.13
TOP3A-205ENST00000477508 GBA2Q9HCG7 927 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-205ENST00000477508 SCAF8Q9UPN6 1271 aaKnown RBP15.85■□□□□ 0.13
TOP3A-205ENST00000477508 CNTNAP1P78357 1384 aa15.85■□□□□ 0.13
TOP3A-205ENST00000477508 RPAP1Q9BWH6 1393 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-205ENST00000477508 MYH7P12883 1935 aa15.84■□□□□ 0.13
TOP3A-205ENST00000477508 MAGEB6P1A0A0J9YX57 407 aa15.84■□□□□ 0.13
TOP3A-205ENST00000477508 RGS3P49796 1198 aa15.84■□□□□ 0.13
TOP3A-205ENST00000477508 FMR1Q06787 632 aaKnown RBP eCLIP15.84■□□□□ 0.13
TOP3A-205ENST00000477508 NFIAQ12857 509 aa15.84■□□□□ 0.13
TOP3A-205ENST00000477508 SH3RF3Q8TEJ3 882 aaPredicted RBP15.84■□□□□ 0.13
TOP3A-205ENST00000477508 FSD1Q9BTV5 496 aa15.84■□□□□ 0.13
TOP3A-205ENST00000477508 TMEM39BQ9GZU3 492 aa15.84■□□□□ 0.13
TOP3A-205ENST00000477508 FAM198AQ9UFP1 575 aa15.84■□□□□ 0.13
TOP3A-205ENST00000477508 RNF113AO15541 343 aaKnown RBP15.83■□□□□ 0.12
TOP3A-205ENST00000477508 TCP10Q12799 353 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 NBPF12Q5TAG4 269 aaPredicted RBP15.83■□□□□ 0.12
TOP3A-205ENST00000477508 PRAMEF18Q5VWM3 479 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 DLK2Q6UY11 383 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 ARMC9Q7Z3E5 817 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 MIGA1Q8NAN2 632 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 HHIPL1Q96JK4 782 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 TEPSINQ96N21 525 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 ABT1Q9ULW3 272 aaKnown RBP15.83■□□□□ 0.12
TOP3A-205ENST00000477508 TLL2Q9Y6L7 1015 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 RFX7Q2KHR2 1363 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 CEP350Q5VT06 3117 aa15.83■□□□□ 0.12
TOP3A-205ENST00000477508 UNCXA6NJT0 531 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms