RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 NBPF9Q3BBW0 867 aa20.3■□□□□ 0.84
EPHB4-204ENST00000477446 ZSCAN25Q6NSZ9 544 aa20.3■□□□□ 0.84
EPHB4-204ENST00000477446 APOBEC3HQ6NTF7 200 aaKnown RBP20.3■□□□□ 0.84
EPHB4-204ENST00000477446 TMED8Q6PL24 325 aaPredicted RBP20.3■□□□□ 0.84
EPHB4-204ENST00000477446 USP50Q70EL3 339 aaPredicted RBP20.3■□□□□ 0.84
EPHB4-204ENST00000477446 ZNF784Q8NCA9 323 aaPredicted RBP20.3■□□□□ 0.84
EPHB4-204ENST00000477446 PNMA8AQ86V59 439 aaPredicted RBP20.29■□□□□ 0.84
EPHB4-204ENST00000477446 ECM29Q5VYK3 1845 aa20.29■□□□□ 0.84
EPHB4-204ENST00000477446 GPR75-ASB3A0A0A6YYF3 556 aa20.29■□□□□ 0.84
EPHB4-204ENST00000477446 RNF113AO15541 343 aaKnown RBP20.29■□□□□ 0.84
EPHB4-204ENST00000477446 UBE3CQ15386 1083 aa20.29■□□□□ 0.84
EPHB4-204ENST00000477446 EAPPQ56P03 285 aaPredicted RBP20.29■□□□□ 0.84
EPHB4-204ENST00000477446 ZFYP08048 801 aaPredicted RBP20.28■□□□□ 0.84
EPHB4-204ENST00000477446 BTDP43251 543 aa20.28■□□□□ 0.84
EPHB4-204ENST00000477446 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
EPHB4-204ENST00000477446 TDRD3Q9H7E2 651 aaKnown RBP20.28■□□□□ 0.84
EPHB4-204ENST00000477446 ASTN2O75129 1339 aaPredicted RBP20.28■□□□□ 0.84
EPHB4-204ENST00000477446 CDC45O75419 566 aa20.27■□□□□ 0.84
EPHB4-204ENST00000477446 POTEIP0CG38 1075 aa20.27■□□□□ 0.84
EPHB4-204ENST00000477446 POTEJP0CG39 1038 aa20.27■□□□□ 0.84
EPHB4-204ENST00000477446 MFAP1P55081 439 aaKnown RBP20.27■□□□□ 0.84
EPHB4-204ENST00000477446 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
EPHB4-204ENST00000477446 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
EPHB4-204ENST00000477446 MIGA1Q8NAN2 632 aa20.26■□□□□ 0.83
EPHB4-204ENST00000477446 AATFQ9NY61 560 aaKnown RBP eCLIP20.26■□□□□ 0.83
EPHB4-204ENST00000477446 RFX7Q2KHR2 1363 aa20.26■□□□□ 0.83
EPHB4-204ENST00000477446 KIF3CO14782 793 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 MYO1BO43795 1136 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 CDC42EP5Q6NZY7 148 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 POLR2AP24928 1970 aaKnown RBP20.25■□□□□ 0.83
EPHB4-204ENST00000477446 CLRN2A0PK11 232 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 BAG3O95817 575 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 PPP4CP60510 307 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 DYNLL1P63167 89 aaKnown RBP20.25■□□□□ 0.83
EPHB4-204ENST00000477446 APPBP2Q92624 585 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 OSBP2Q969R2 916 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
EPHB4-204ENST00000477446 PUS7LQ9H0K6 701 aaKnown RBP20.25■□□□□ 0.83
EPHB4-204ENST00000477446 USP40Q9NVE5 1235 aa20.25■□□□□ 0.83
EPHB4-204ENST00000477446 ZNF70Q9UC06 446 aaPredicted RBP20.25■□□□□ 0.83
EPHB4-204ENST00000477446 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
EPHB4-204ENST00000477446 RHBDL3P58872 404 aa20.24■□□□□ 0.83
EPHB4-204ENST00000477446 SPDYE2Q495Y8 402 aa20.24■□□□□ 0.83
EPHB4-204ENST00000477446 ZMYM1Q5SVZ6 1142 aa20.24■□□□□ 0.83
EPHB4-204ENST00000477446 ANGEL2Q5VTE6 544 aaKnown RBP20.24■□□□□ 0.83
EPHB4-204ENST00000477446 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
EPHB4-204ENST00000477446 RIOK1Q9BRS2 568 aaKnown RBP20.24■□□□□ 0.83
EPHB4-204ENST00000477446 GGA3Q9NZ52 723 aa20.24■□□□□ 0.83
EPHB4-204ENST00000477446 PGAP2Q9UHJ9 254 aa20.24■□□□□ 0.83
EPHB4-204ENST00000477446 CLEC11AQ9Y240 323 aa20.24■□□□□ 0.83
EPHB4-204ENST00000477446 SH3RF3Q8TEJ3 882 aaPredicted RBP20.23■□□□□ 0.83
EPHB4-204ENST00000477446 FAM227BQ96M60 508 aa20.23■□□□□ 0.83
EPHB4-204ENST00000477446 SEC62Q99442 399 aaKnown RBP20.23■□□□□ 0.83
EPHB4-204ENST00000477446 CDK5RAP2Q96SN8 1893 aa20.22■□□□□ 0.83
EPHB4-204ENST00000477446 CACNB3P54284 484 aa20.22■□□□□ 0.83
EPHB4-204ENST00000477446 CASC1Q6TDU7 716 aa20.22■□□□□ 0.83
EPHB4-204ENST00000477446 LDHDQ86WU2 507 aa20.22■□□□□ 0.83
EPHB4-204ENST00000477446 M0R2C6 588 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 HIP1O00291 1037 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 PLCG2P16885 1265 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 SLC4A3P48751 1232 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 NMIQ13287 307 aaPredicted RBP20.21■□□□□ 0.83
EPHB4-204ENST00000477446 LCORLQ8N3X6 602 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 ARMT1Q9H993 441 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 DIAPH3Q9NSV4 1193 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 SCAF8Q9UPN6 1271 aaKnown RBP20.21■□□□□ 0.83
EPHB4-204ENST00000477446 PITPNM2Q9BZ72 1349 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 A0A0D9SFI3 127 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 MBD4O95243 580 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 CHMLP26374 656 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 CERS3Q8IU89 383 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 AIDAQ96BJ3 306 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 DCPSQ96C86 337 aaKnown RBP20.21■□□□□ 0.83
EPHB4-204ENST00000477446 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 TMOD2Q9NZR1 351 aa20.21■□□□□ 0.83
EPHB4-204ENST00000477446 TCP10L2B9ZVM9 353 aa20.2■□□□□ 0.82
EPHB4-204ENST00000477446 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
EPHB4-204ENST00000477446 NFIAQ12857 509 aa20.2■□□□□ 0.82
EPHB4-204ENST00000477446 CWC27Q6UX04 472 aaKnown RBP20.2■□□□□ 0.82
EPHB4-204ENST00000477446 TEX11Q8IYF3 940 aa20.2■□□□□ 0.82
EPHB4-204ENST00000477446 FOCADQ5VW36 1801 aa20.2■□□□□ 0.82
EPHB4-204ENST00000477446 GPAA1O43292 621 aa20.19■□□□□ 0.82
EPHB4-204ENST00000477446 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
EPHB4-204ENST00000477446 MAP1SQ66K74 1059 aaPredicted RBP20.19■□□□□ 0.82
EPHB4-204ENST00000477446 IDI2Q9BXS1 227 aa20.19■□□□□ 0.82
EPHB4-204ENST00000477446 FKBP1CQ5VVH2 108 aa20.18■□□□□ 0.82
EPHB4-204ENST00000477446 CCDC129Q6ZRS4 1044 aa20.18■□□□□ 0.82
EPHB4-204ENST00000477446 APOBEC3FQ8IUX4 373 aaKnown RBP20.18■□□□□ 0.82
EPHB4-204ENST00000477446 TGFBRAP1Q8WUH2 860 aa20.18■□□□□ 0.82
EPHB4-204ENST00000477446 STRBPQ96SI9 672 aaKnown RBP20.18■□□□□ 0.82
EPHB4-204ENST00000477446 DDX4Q9NQI0 724 aaKnown RBP20.18■□□□□ 0.82
EPHB4-204ENST00000477446 NBR1Q14596 966 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 CHADLQ6NUI6 762 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 KRT26Q7Z3Y9 468 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 SNX21Q969T3 373 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
EPHB4-204ENST00000477446 FAM198AQ9UFP1 575 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 CNTNAP1P78357 1384 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 PRKAB2O43741 272 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms