RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 RNF43Q68DV7 783 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 XKR5Q6UX68 686 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 C1orf127Q8N9H9 656 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 DBNDD2Q9BQY9 259 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 ADAM19Q9H013 955 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 KIDINS220Q9ULH0 1771 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 INO80Q9ULG1 1556 aaPredicted RBP6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 DIP2CQ9Y2E4 1556 aa6.61□□□□□ -1.35
NSMCE4A-208ENST00000477289 NCOA1Q15788 1441 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 ERBINQ96RT1 1412 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 HMX2A2RU54 273 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 TMEM88BA6NKF7 163 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 ADAM11O75078 769 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 PDGFAP04085 211 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 JAG1P78504 1218 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 DNM1Q05193 864 aaKnown RBP6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 UVSSAQ2YD98 709 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 KIAA1211Q6ZU35 1233 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 UTP4Q969X6 686 aaKnown RBP6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 CROCC2H7BZ55 1655 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 PLXNC1O60486 1568 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 AGLP35573 1532 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 ADGRL2O95490 1459 aa6.6□□□□□ -1.35
NSMCE4A-208ENST00000477289 CNTLNQ9NXG0 1405 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 ANKRD50Q9ULJ7 1429 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 ABCA6Q8N139 1617 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 DDX3YO15523 660 aaKnown RBP6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 PTPRAP18433 802 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 MPSTP25325 297 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 SSFA2P28290 1259 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 EIF1AXP47813 144 aaKnown RBP6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 ACAD11Q709F0 780 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 KLHL23Q8NBE8 558 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 GTF3C2Q8WUA4 911 aaPredicted RBP6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 FOXD4L4Q8WXT5 416 aaPredicted RBP6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 KLHDC7BQ96G42 594 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 FAM46AQ96IP4 442 aaKnown RBP6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 CHRDQ9H2X0 955 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 REREQ9P2R6 1566 aa6.59□□□□□ -1.35
NSMCE4A-208ENST00000477289 TRPA1O75762 1119 aa6.58□□□□□ -1.36
NSMCE4A-208ENST00000477289 RPLP1P05386 114 aaKnown RBP6.58□□□□□ -1.36
NSMCE4A-208ENST00000477289 MTMR3Q13615 1198 aa6.58□□□□□ -1.36
NSMCE4A-208ENST00000477289 HHIPQ96QV1 700 aa6.58□□□□□ -1.36
NSMCE4A-208ENST00000477289 DZANK1Q9NVP4 752 aa6.58□□□□□ -1.36
NSMCE4A-208ENST00000477289 CES1P23141 567 aa6.57□□□□□ -1.36
NSMCE4A-208ENST00000477289 MZF1P28698 734 aaPredicted RBP6.57□□□□□ -1.36
NSMCE4A-208ENST00000477289 CCDC82Q8N4S0 544 aa6.57□□□□□ -1.36
NSMCE4A-208ENST00000477289 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
NSMCE4A-208ENST00000477289 MYRFLQ96LU7 910 aa6.57□□□□□ -1.36
NSMCE4A-208ENST00000477289 SEC31BQ9NQW1 1179 aa6.57□□□□□ -1.36
NSMCE4A-208ENST00000477289 EIF2AK4Q9P2K8 1649 aaKnown RBP6.57□□□□□ -1.36
NSMCE4A-208ENST00000477289 H3BRJ5 948 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 NPR3P17342 541 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 DUOXA2Q1HG44 320 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 C8orf34Q49A92 452 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 FAM117BQ6P1L5 589 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 CLEC10AQ8IUN9 316 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 SHKBP1Q8TBC3 707 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 POLIQ9UNA4 740 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 HFM1A2PYH4 1435 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 SETD5Q9C0A6 1442 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 NUP155O75694 1391 aa6.56□□□□□ -1.36
NSMCE4A-208ENST00000477289 FAM135AQ9P2D6 1515 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 PDE2AO00408 941 aaPredicted RBP6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 PIP4K2BP78356 416 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 HGSNATQ68CP4 663 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 OGFOD2Q6N063 350 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 PHLDB3Q6NSJ2 640 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 FAM20CQ8IXL6 584 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 ABI1Q8IZP0 508 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 WNT8BQ93098 351 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 C1orf115Q9H7X2 142 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 SOX13Q9UN79 622 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 PTPRKQ15262 1439 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 BCORL1Q5H9F3 1711 aa6.55□□□□□ -1.36
NSMCE4A-208ENST00000477289 CARNS1A5YM72 827 aa6.54□□□□□ -1.36
NSMCE4A-208ENST00000477289 PCSK2P16519 638 aa6.54□□□□□ -1.36
NSMCE4A-208ENST00000477289 TMEM102Q8N9M5 508 aaPredicted RBP6.54□□□□□ -1.36
NSMCE4A-208ENST00000477289 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
NSMCE4A-208ENST00000477289 OSGEPQ9NPF4 335 aa6.54□□□□□ -1.36
NSMCE4A-208ENST00000477289 KDM5DQ9BY66 1539 aa6.54□□□□□ -1.36
NSMCE4A-208ENST00000477289 ZMYM3Q14202 1370 aa6.54□□□□□ -1.36
NSMCE4A-208ENST00000477289 NAIPQ13075 1403 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 EREGO14944 169 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 HOXA10P31260 410 aaPredicted RBP6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 CABP4P57796 275 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 PMEPA1Q969W9 287 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 NXPE3Q969Y0 559 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 OSMRQ99650 979 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 ZKSCAN3Q9BRR0 538 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 KCNF1Q9H3M0 494 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 GTF3C3Q9Y5Q9 886 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 FER1L4A9Z1Z3 1794 aa6.53□□□□□ -1.36
NSMCE4A-208ENST00000477289 ZC3H13Q5T200 1668 aaKnown RBP6.52□□□□□ -1.37
NSMCE4A-208ENST00000477289 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms