RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PDGFAP04085 211 aa6.24□□□□□ -1.41
XRN1-211ENST00000477237 FAM87AP0C7U9 286 aa6.24□□□□□ -1.41
XRN1-211ENST00000477237 EDN3P14138 238 aa6.24□□□□□ -1.41
XRN1-211ENST00000477237 CDK5R2Q13319 367 aa6.24□□□□□ -1.41
XRN1-211ENST00000477237 AOC3Q16853 763 aa6.24□□□□□ -1.41
XRN1-211ENST00000477237 ZNF423Q2M1K9 1284 aa6.24□□□□□ -1.41
XRN1-211ENST00000477237 PEAR1Q5VY43 1037 aaPredicted RBP6.24□□□□□ -1.41
XRN1-211ENST00000477237 CYP11A1P05108 521 aa6.23□□□□□ -1.41
XRN1-211ENST00000477237 PCDH1Q08174 1060 aa6.23□□□□□ -1.41
XRN1-211ENST00000477237 KCNMB1Q16558 191 aa6.23□□□□□ -1.41
XRN1-211ENST00000477237 LIN37Q96GY3 246 aaPredicted RBP6.23□□□□□ -1.41
XRN1-211ENST00000477237 PRDM7Q9NQW5 492 aa6.23□□□□□ -1.41
XRN1-211ENST00000477237 SEPT3Q9UH03 358 aa6.23□□□□□ -1.41
XRN1-211ENST00000477237 PCSK2P16519 638 aa6.22□□□□□ -1.41
XRN1-211ENST00000477237 ELOAQ14241 798 aaKnown RBP6.22□□□□□ -1.41
XRN1-211ENST00000477237 IFI16Q16666 785 aaKnown RBP6.22□□□□□ -1.41
XRN1-211ENST00000477237 HP1BP3Q5SSJ5 553 aaPredicted RBP6.22□□□□□ -1.41
XRN1-211ENST00000477237 SLC23A3Q6PIS1 610 aa6.22□□□□□ -1.41
XRN1-211ENST00000477237 ANKLE2Q86XL3 938 aa6.22□□□□□ -1.41
XRN1-211ENST00000477237 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
XRN1-211ENST00000477237 PHACTR2O75167 634 aa6.21□□□□□ -1.42
XRN1-211ENST00000477237 KRT1P04264 644 aa6.21□□□□□ -1.42
XRN1-211ENST00000477237 ANGEL2Q5VTE6 544 aaKnown RBP6.21□□□□□ -1.42
XRN1-211ENST00000477237 SYDE1Q6ZW31 735 aaPredicted RBP6.21□□□□□ -1.42
XRN1-211ENST00000477237 TTC16Q8NEE8 873 aa6.21□□□□□ -1.42
XRN1-211ENST00000477237 HRASLS5Q96KN8 279 aa6.21□□□□□ -1.42
XRN1-211ENST00000477237 TRIM56Q9BRZ2 755 aaKnown RBP6.21□□□□□ -1.42
XRN1-211ENST00000477237 RAPGEFL1Q9UHV5 662 aa6.21□□□□□ -1.42
XRN1-211ENST00000477237 PPP1R9AQ9ULJ8 1098 aa6.21□□□□□ -1.42
XRN1-211ENST00000477237 PLAGL2Q9UPG8 496 aa6.21□□□□□ -1.42
XRN1-211ENST00000477237 AOC2O75106 756 aa6.2□□□□□ -1.42
XRN1-211ENST00000477237 TNFRSF21O75509 655 aa6.2□□□□□ -1.42
XRN1-211ENST00000477237 WDR18Q9BV38 432 aa6.2□□□□□ -1.42
XRN1-211ENST00000477237 CLEC4MQ9H2X3 399 aaPredicted RBP6.2□□□□□ -1.42
XRN1-211ENST00000477237 FOXD3Q9UJU5 478 aaPredicted RBP6.2□□□□□ -1.42
XRN1-211ENST00000477237 A0A096LPE4 126 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 A0A1W2PPZ6 126 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 LEFTY1O75610 366 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 C1QTNF9P0C862 333 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 MZF1P28698 734 aaPredicted RBP6.19□□□□□ -1.42
XRN1-211ENST00000477237 OXCT1P55809 520 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 SPRED3Q2MJR0 410 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 FYB2Q5VWT5 728 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 PRR23BQ6ZRT6 265 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 CORO1BQ9BR76 489 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 ZFYVE1Q9HBF4 777 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 MKNK2Q9HBH9 465 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 JAG2Q9Y219 1238 aa6.19□□□□□ -1.42
XRN1-211ENST00000477237 TMEM265A0A087WTH1 108 aa6.18□□□□□ -1.42
XRN1-211ENST00000477237 CEACAM5P06731 702 aa6.18□□□□□ -1.42
XRN1-211ENST00000477237 NOM1Q5C9Z4 860 aaKnown RBP6.18□□□□□ -1.42
XRN1-211ENST00000477237 SNX29Q8TEQ0 813 aa6.18□□□□□ -1.42
XRN1-211ENST00000477237 SLAIN2Q9P270 581 aa6.18□□□□□ -1.42
XRN1-211ENST00000477237 GRIA4P48058 902 aa6.17□□□□□ -1.42
XRN1-211ENST00000477237 TMEM164Q5U3C3 297 aa6.17□□□□□ -1.42
XRN1-211ENST00000477237 CLP1Q92989 425 aaKnown RBP6.17□□□□□ -1.42
XRN1-211ENST00000477237 POLIQ9UNA4 740 aa6.17□□□□□ -1.42
XRN1-211ENST00000477237 CTNND2Q9UQB3 1225 aa6.17□□□□□ -1.42
XRN1-211ENST00000477237 TMPRSS2O15393 492 aa6.16□□□□□ -1.42
XRN1-211ENST00000477237 INHBBP09529 407 aa6.16□□□□□ -1.42
XRN1-211ENST00000477237 EIF1AXP47813 144 aaKnown RBP6.16□□□□□ -1.42
XRN1-211ENST00000477237 PDE3AQ14432 1141 aa6.16□□□□□ -1.42
XRN1-211ENST00000477237 ARHGAP27Q6ZUM4 889 aa6.16□□□□□ -1.42
XRN1-211ENST00000477237 AMIGO3Q86WK7 504 aa6.16□□□□□ -1.42
XRN1-211ENST00000477237 CCNJLQ8IV13 435 aa6.16□□□□□ -1.42
XRN1-211ENST00000477237 AMOTL2Q9Y2J4 779 aa6.16□□□□□ -1.42
XRN1-211ENST00000477237 POLR3DP05423 398 aaPredicted RBP6.15□□□□□ -1.42
XRN1-211ENST00000477237 ITIH2P19823 946 aa6.15□□□□□ -1.42
XRN1-211ENST00000477237 HELQQ8TDG4 1101 aa6.15□□□□□ -1.42
XRN1-211ENST00000477237 WDR89Q96FK6 387 aaPredicted RBP6.15□□□□□ -1.42
XRN1-211ENST00000477237 TCF12Q99081 682 aa6.15□□□□□ -1.42
XRN1-211ENST00000477237 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
XRN1-211ENST00000477237 TNKS2Q9H2K2 1166 aa6.15□□□□□ -1.42
XRN1-211ENST00000477237 SYNGAP1Q96PV0 1343 aa6.15□□□□□ -1.43
XRN1-211ENST00000477237 B3GALT4O96024 378 aa6.14□□□□□ -1.43
XRN1-211ENST00000477237 MPSTP25325 297 aa6.14□□□□□ -1.43
XRN1-211ENST00000477237 CTSWP56202 376 aa6.14□□□□□ -1.43
XRN1-211ENST00000477237 ZP2Q05996 745 aa6.14□□□□□ -1.43
XRN1-211ENST00000477237 SMYD4Q8IYR2 804 aaPredicted RBP6.14□□□□□ -1.43
XRN1-211ENST00000477237 FANCD2OSQ96PS1 177 aa6.14□□□□□ -1.43
XRN1-211ENST00000477237 PIDD1Q9HB75 910 aa6.14□□□□□ -1.43
XRN1-211ENST00000477237 A0A1W2PP55 124 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 NPIPB6E9PJ23 425 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 NFIBO00712 420 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 GLI1P08151 1106 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 LIG1P18858 919 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 AFMP43652 599 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 MPZL3Q6UWV2 235 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 LIN7BQ9HAP6 207 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 ZFYVE28Q9HCC9 887 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 SNX11Q9Y5W9 270 aa6.13□□□□□ -1.43
XRN1-211ENST00000477237 IKZF1Q13422 519 aa6.12□□□□□ -1.43
XRN1-211ENST00000477237 DDX54Q8TDD1 881 aaKnown RBP6.12□□□□□ -1.43
XRN1-211ENST00000477237 C20orf173Q96LM9 149 aa6.12□□□□□ -1.43
XRN1-211ENST00000477237 ATXN3LQ9H3M9 355 aa6.12□□□□□ -1.43
XRN1-211ENST00000477237 DISC1Q9NRI5 854 aa6.12□□□□□ -1.43
XRN1-211ENST00000477237 ATP2B4P23634 1241 aa6.11□□□□□ -1.43
XRN1-211ENST00000477237 SRPK2P78362 688 aaKnown RBP6.11□□□□□ -1.43
XRN1-211ENST00000477237 ASB11Q8WXH4 323 aa6.11□□□□□ -1.43
XRN1-211ENST00000477237 HEXIM2Q96MH2 286 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms