RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 Q6ZUG5 572 aa17.15■□□□□ 0.34
COL4A6-206ENST00000477085 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
COL4A6-206ENST00000477085 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
COL4A6-206ENST00000477085 HMGB1P09429 215 aaKnown RBP17.15■□□□□ 0.34
COL4A6-206ENST00000477085 TDO2P48775 406 aa17.15■□□□□ 0.34
COL4A6-206ENST00000477085 ANTXR2P58335 489 aa17.15■□□□□ 0.34
COL4A6-206ENST00000477085 EVX2Q03828 476 aa17.15■□□□□ 0.34
COL4A6-206ENST00000477085 PODNQ7Z5L7 613 aa17.15■□□□□ 0.34
COL4A6-206ENST00000477085 MROH7-TTC4A0A0A0MT08 1334 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 ECE2O60344 883 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 DTNBO60941 627 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 PPP4CP60510 307 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
COL4A6-206ENST00000477085 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 AGXT2Q9BYV1 514 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 NACAP1Q9BZK3 213 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
COL4A6-206ENST00000477085 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
COL4A6-206ENST00000477085 NEDD4P46934 1319 aa17.13■□□□□ 0.33
COL4A6-206ENST00000477085 CCDC88AQ3V6T2 1871 aa17.13■□□□□ 0.33
COL4A6-206ENST00000477085 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
COL4A6-206ENST00000477085 GSTO1P78417 241 aa17.13■□□□□ 0.33
COL4A6-206ENST00000477085 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
COL4A6-206ENST00000477085 NECAB1Q8N987 351 aa17.13■□□□□ 0.33
COL4A6-206ENST00000477085 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
COL4A6-206ENST00000477085 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
COL4A6-206ENST00000477085 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
COL4A6-206ENST00000477085 PIM2Q9P1W9 311 aa17.13■□□□□ 0.33
COL4A6-206ENST00000477085 MKRN1Q9UHC7 482 aaKnown RBP17.13■□□□□ 0.33
COL4A6-206ENST00000477085 GPR75-ASB3A0A0A6YYF3 556 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 G3V3G9 751 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 CTR9Q6PD62 1173 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 CYB5R4Q7L1T6 521 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 PPP1R1BQ9UD71 204 aaPredicted RBP17.12■□□□□ 0.33
COL4A6-206ENST00000477085 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 PPARAQ07869 468 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 PKP1Q13835 747 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 ANKRD1Q15327 319 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 DACT2Q5SW24 774 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 GIMAP6Q6P9H5 292 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 RTKN2Q8IZC4 609 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 BRF1Q92994 677 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 ZSCAN31Q96LW9 406 aaPredicted RBP17.12■□□□□ 0.33
COL4A6-206ENST00000477085 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
COL4A6-206ENST00000477085 GAKO14976 1311 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 F8W031 263 aaPredicted RBP17.11■□□□□ 0.33
COL4A6-206ENST00000477085 LDHCP07864 332 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 BTDP43251 543 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 STK11IPQ8N1F8 1099 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 FBXL16Q8N461 479 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 PSMD1Q99460 953 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 CRNKL1Q9BZJ0 848 aaKnown RBP17.11■□□□□ 0.33
COL4A6-206ENST00000477085 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 COL4A5P29400 1685 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 SCN9AQ15858 1988 aa17.11■□□□□ 0.33
COL4A6-206ENST00000477085 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 B4E1Z4 1266 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 USP17L12C9JPN9 530 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 USP17L21D6R901 530 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 PPIP5K2O43314 1243 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 PRC1O43663 620 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 CYP2D6P10635 497 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 RHBDL3P58872 404 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 STAG1Q8WVM7 1258 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
COL4A6-206ENST00000477085 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
COL4A6-206ENST00000477085 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
COL4A6-206ENST00000477085 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 CIZ1Q9ULV3 898 aaPredicted RBP17.1■□□□□ 0.33
COL4A6-206ENST00000477085 DAGLAQ9Y4D2 1042 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 CD2APQ9Y5K6 639 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
COL4A6-206ENST00000477085 MCM5P33992 734 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 APOBRQ0VD83 1088 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 STRIP1Q5VSL9 837 aa17.1■□□□□ 0.33
COL4A6-206ENST00000477085 TTF2Q9UNY4 1162 aaKnown RBP17.1■□□□□ 0.33
COL4A6-206ENST00000477085 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
COL4A6-206ENST00000477085 BAG3O95817 575 aa17.09■□□□□ 0.33
COL4A6-206ENST00000477085 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
COL4A6-206ENST00000477085 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
COL4A6-206ENST00000477085 ZSWIM5Q9P217 1185 aa17.09■□□□□ 0.33
COL4A6-206ENST00000477085 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
COL4A6-206ENST00000477085 USP17L8P0C7I0 530 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 SCNN1DP51172 638 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 STK3Q13188 491 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 MFSD6Q6ZSS7 791 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 ILDR2Q71H61 639 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 KLHL34Q8N239 644 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.33
COL4A6-206ENST00000477085 USP17L3A6NCW0 530 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 USP17L4A6NCW7 530 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms