RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 NECAB2Q7Z6G3 386 aa19.68■□□□□ 0.74
SMG5-204ENST00000476954 G2E3Q7L622 706 aa19.67■□□□□ 0.74
SMG5-204ENST00000476954 TDRD7Q8NHU6 1098 aaKnown RBP19.67■□□□□ 0.74
SMG5-204ENST00000476954 RUNDC1Q96C34 613 aa19.67■□□□□ 0.74
SMG5-204ENST00000476954 KCNH4Q9UQ05 1017 aa19.67■□□□□ 0.74
SMG5-204ENST00000476954 DDX60LQ5H9U9 1706 aaKnown RBP19.67■□□□□ 0.74
SMG5-204ENST00000476954 SPTBN5Q9NRC6 3674 aaKnown RBP19.66■□□□□ 0.74
SMG5-204ENST00000476954 GYG1P46976 350 aa19.66■□□□□ 0.74
SMG5-204ENST00000476954 GCKRQ14397 625 aa19.66■□□□□ 0.74
SMG5-204ENST00000476954 GPAT2Q6NUI2 795 aa19.66■□□□□ 0.74
SMG5-204ENST00000476954 FAM161BQ96MY7 647 aa19.66■□□□□ 0.74
SMG5-204ENST00000476954 UBE2OQ9C0C9 1292 aaKnown RBP19.66■□□□□ 0.74
SMG5-204ENST00000476954 VCANP13611 3396 aa19.66■□□□□ 0.74
SMG5-204ENST00000476954 CCDC30Q5VVM6 783 aa19.65■□□□□ 0.74
SMG5-204ENST00000476954 TSPYL6Q8N831 410 aa19.65■□□□□ 0.74
SMG5-204ENST00000476954 ZNF594Q96JF6 807 aaPredicted RBP19.65■□□□□ 0.74
SMG5-204ENST00000476954 PARK7Q99497 189 aaKnown RBP19.65■□□□□ 0.74
SMG5-204ENST00000476954 TAOK2Q9UL54 1235 aa19.65■□□□□ 0.74
SMG5-204ENST00000476954 PXYLP1Q8TE99 480 aa19.64■□□□□ 0.73
SMG5-204ENST00000476954 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.64■□□□□ 0.73
SMG5-204ENST00000476954 ZNF341Q9BYN7 854 aa19.63■□□□□ 0.73
SMG5-204ENST00000476954 IQSEC3Q9UPP2 1182 aaPredicted RBP19.63■□□□□ 0.73
SMG5-204ENST00000476954 CHMP3Q9Y3E7 222 aa19.63■□□□□ 0.73
SMG5-204ENST00000476954 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
SMG5-204ENST00000476954 IRF5Q13568 498 aa19.62■□□□□ 0.73
SMG5-204ENST00000476954 FAM84BQ96KN1 310 aaPredicted RBP19.62■□□□□ 0.73
SMG5-204ENST00000476954 IFT57Q9NWB7 429 aa19.62■□□□□ 0.73
SMG5-204ENST00000476954 POTEB2H3BUK9 544 aa19.61■□□□□ 0.73
SMG5-204ENST00000476954 TNPO2O14787 897 aaKnown RBP19.61■□□□□ 0.73
SMG5-204ENST00000476954 HIBADHP31937 336 aaKnown RBP19.61■□□□□ 0.73
SMG5-204ENST00000476954 FOXO4P98177 505 aa19.61■□□□□ 0.73
SMG5-204ENST00000476954 IFIT5Q13325 482 aaKnown RBP19.61■□□□□ 0.73
SMG5-204ENST00000476954 DCAF15Q66K64 600 aa19.61■□□□□ 0.73
SMG5-204ENST00000476954 CHAF1AQ13111 956 aaPredicted RBP19.6■□□□□ 0.73
SMG5-204ENST00000476954 FAM83AQ86UY5 434 aa19.6■□□□□ 0.73
SMG5-204ENST00000476954 NBPF3Q9H094 633 aa19.6■□□□□ 0.73
SMG5-204ENST00000476954 RAPGEFL1Q9UHV5 662 aa19.6■□□□□ 0.73
SMG5-204ENST00000476954 CAPN2P17655 700 aa19.59■□□□□ 0.73
SMG5-204ENST00000476954 GNAI1P63096 354 aa19.59■□□□□ 0.73
SMG5-204ENST00000476954 TRIM32Q13049 653 aa19.59■□□□□ 0.73
SMG5-204ENST00000476954 APOBEC3HQ6NTF7 200 aaKnown RBP19.59■□□□□ 0.73
SMG5-204ENST00000476954 ZNF112Q9UJU3 913 aa19.59■□□□□ 0.73
SMG5-204ENST00000476954 COL9A1P20849 921 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 EPHA10Q5JZY3 1008 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 ANKLE1Q8NAG6 615 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 TEKT1Q969V4 418 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 HOOK2Q96ED9 719 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 C11orf49Q9H6J7 331 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 TMOD2Q9NZR1 351 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 ADAMTS8Q9UP79 889 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 PTPRFP10586 1907 aa19.58■□□□□ 0.72
SMG5-204ENST00000476954 RPAP1Q9BWH6 1393 aaPredicted RBP19.57■□□□□ 0.72
SMG5-204ENST00000476954 HDLBPQ00341 1268 aaKnown RBP19.57■□□□□ 0.72
SMG5-204ENST00000476954 MDM2Q00987 491 aaPredicted RBP19.57■□□□□ 0.72
SMG5-204ENST00000476954 LDHAL6AQ6ZMR3 332 aa19.57■□□□□ 0.72
SMG5-204ENST00000476954 ZDHHC15Q96MV8 337 aa19.57■□□□□ 0.72
SMG5-204ENST00000476954 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
SMG5-204ENST00000476954 COL2A1P02458 1487 aaPredicted RBP19.56■□□□□ 0.72
SMG5-204ENST00000476954 FKBP1CQ5VVH2 108 aa19.56■□□□□ 0.72
SMG5-204ENST00000476954 FAM109BQ6ICB4 259 aaPredicted RBP19.56■□□□□ 0.72
SMG5-204ENST00000476954 LMBR1LQ6UX01 489 aa19.56■□□□□ 0.72
SMG5-204ENST00000476954 PFASO15067 1338 aa19.55■□□□□ 0.72
SMG5-204ENST00000476954 CXCL11O14625 94 aa19.55■□□□□ 0.72
SMG5-204ENST00000476954 TCP10Q12799 353 aa19.55■□□□□ 0.72
SMG5-204ENST00000476954 NOL9Q5SY16 702 aaKnown RBP19.55■□□□□ 0.72
SMG5-204ENST00000476954 GADL1Q6ZQY3 521 aa19.55■□□□□ 0.72
SMG5-204ENST00000476954 MYH16Q9H6N6 1097 aa19.55■□□□□ 0.72
SMG5-204ENST00000476954 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
SMG5-204ENST00000476954 STK31Q9BXU1 1019 aa19.54■□□□□ 0.72
SMG5-204ENST00000476954 PUS3Q9BZE2 481 aaKnown RBP19.54■□□□□ 0.72
SMG5-204ENST00000476954 EYSQ5T1H1 3165 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 A0A0G2JLL6 359 aaPredicted RBP19.53■□□□□ 0.72
SMG5-204ENST00000476954 SLC4A2P04920 1241 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMG5-204ENST00000476954 TAF7LQ5H9L4 462 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 PRRT2Q7Z6L0 340 aaPredicted RBP19.53■□□□□ 0.72
SMG5-204ENST00000476954 ANKRD13CQ8N6S4 541 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 LINS1Q8NG48 757 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 MAFAQ8NHW3 353 aaPredicted RBP19.53■□□□□ 0.72
SMG5-204ENST00000476954 FAM151AQ8WW52 585 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 COA7Q96BR5 231 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 CDX2Q99626 313 aaPredicted RBP19.53■□□□□ 0.72
SMG5-204ENST00000476954 ZHX2Q9Y6X8 837 aa19.53■□□□□ 0.72
SMG5-204ENST00000476954 HMGCRP04035 888 aa19.52■□□□□ 0.72
SMG5-204ENST00000476954 DNAAF4Q8WXU2 420 aa19.52■□□□□ 0.72
SMG5-204ENST00000476954 TSR2Q969E8 191 aaKnown RBP19.52■□□□□ 0.72
SMG5-204ENST00000476954 PLXNB2O15031 1838 aa19.52■□□□□ 0.72
SMG5-204ENST00000476954 PHIPQ8WWQ0 1821 aa19.52■□□□□ 0.72
SMG5-204ENST00000476954 NFIAQ12857 509 aa19.51■□□□□ 0.71
SMG5-204ENST00000476954 CCDC57Q2TAC2 916 aa19.51■□□□□ 0.71
SMG5-204ENST00000476954 FASTKD5Q7L8L6 764 aaKnown RBP19.51■□□□□ 0.71
SMG5-204ENST00000476954 FBXO33Q7Z6M2 555 aa19.51■□□□□ 0.71
SMG5-204ENST00000476954 SMCR8Q8TEV9 937 aaPredicted RBP19.51■□□□□ 0.71
SMG5-204ENST00000476954 HMX1Q9NP08 348 aaPredicted RBP19.51■□□□□ 0.71
SMG5-204ENST00000476954 OGDHLQ9ULD0 1010 aa19.51■□□□□ 0.71
SMG5-204ENST00000476954 PRUNE2Q8WUY3 3088 aa19.5■□□□□ 0.71
SMG5-204ENST00000476954 APAF1O14727 1248 aa19.5■□□□□ 0.71
SMG5-204ENST00000476954 FLIIQ13045 1269 aa19.5■□□□□ 0.71
SMG5-204ENST00000476954 LRRC26Q2I0M4 334 aa19.5■□□□□ 0.71
SMG5-204ENST00000476954 ZNF697Q5TEC3 545 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms