RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 BMP6P22004 513 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 NME2P22392 152 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 ARNTP27540 789 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 DAB2P98082 770 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 MEI1Q5TIA1 1274 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 MAP1SQ66K74 1059 aaPredicted RBP6.32□□□□□ -1.4
ITGA4-208ENST00000476824 BEND4Q6ZU67 534 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 FBLIM1Q8WUP2 373 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 FRMD6Q96NE9 622 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 C7orf69Q9H7B7 122 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 CBX8Q9HC52 389 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 PPM1HQ9ULR3 514 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 ACTL7BQ9Y614 415 aa6.32□□□□□ -1.4
ITGA4-208ENST00000476824 EIF4EBP3O60516 100 aaPredicted RBP6.31□□□□□ -1.4
ITGA4-208ENST00000476824 CTSHP09668 335 aa6.31□□□□□ -1.4
ITGA4-208ENST00000476824 MAP4P27816 1152 aaKnown RBP6.31□□□□□ -1.4
ITGA4-208ENST00000476824 RXRBP28702 533 aa6.31□□□□□ -1.4
ITGA4-208ENST00000476824 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
ITGA4-208ENST00000476824 XPCQ01831 940 aaPredicted RBP6.31□□□□□ -1.4
ITGA4-208ENST00000476824 BCL2L13Q9BXK5 485 aa6.31□□□□□ -1.4
ITGA4-208ENST00000476824 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
ITGA4-208ENST00000476824 TTBK1Q5TCY1 1321 aaPredicted RBP6.3□□□□□ -1.4
ITGA4-208ENST00000476824 USP11P51784 963 aa6.3□□□□□ -1.4
ITGA4-208ENST00000476824 ZNF252P-AS1Q0IIN9 211 aa6.3□□□□□ -1.4
ITGA4-208ENST00000476824 TMC4Q7Z404 712 aa6.3□□□□□ -1.4
ITGA4-208ENST00000476824 SHISA5Q8N114 240 aa6.3□□□□□ -1.4
ITGA4-208ENST00000476824 GPBAR1Q8TDU6 330 aa6.3□□□□□ -1.4
ITGA4-208ENST00000476824 GIPC2Q8TF65 315 aa6.3□□□□□ -1.4
ITGA4-208ENST00000476824 CEP44Q9C0F1 390 aa6.3□□□□□ -1.4
ITGA4-208ENST00000476824 TMPRSS2O15393 492 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 ERCC3P19447 782 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 RAB6AP20340 208 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 FGD1P98174 961 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 KIF4BQ2VIQ3 1234 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 HP1BP3Q5SSJ5 553 aaPredicted RBP6.29□□□□□ -1.4
ITGA4-208ENST00000476824 PCNX4Q63HM2 1172 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 PCDHGC5Q9Y5F6 944 aa6.29□□□□□ -1.4
ITGA4-208ENST00000476824 NFICP08651 508 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 ASPAP45381 313 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 PTPN11Q06124 597 aaPredicted RBP6.28□□□□□ -1.4
ITGA4-208ENST00000476824 NFKBIBQ15653 356 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 CCDC85BQ15834 202 aaPredicted RBP6.28□□□□□ -1.4
ITGA4-208ENST00000476824 ZMYM1Q5SVZ6 1142 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 ANKRD24Q8TF21 1146 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 EMILIN2Q9BXX0 1053 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 KRT82Q9NSB4 513 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
ITGA4-208ENST00000476824 FAM95CA0A1B0GW59 222 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 F6X3S4 739 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 DYNC1LI2O43237 492 aaPredicted RBP6.27□□□□□ -1.41
ITGA4-208ENST00000476824 IGLV1-40P01703 118 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 ID3Q02535 119 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 NFIAQ12857 509 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 RNF43Q68DV7 783 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 LLGL2Q6P1M3 1020 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 ACSBG1Q96GR2 724 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 MFSD14AQ96MC6 490 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 FANCD2OSQ96PS1 177 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 SEMA6CQ9H3T2 930 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 ACSS3Q9H6R3 686 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 DISC1Q9NRI5 854 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 CRIM1Q9NZV1 1036 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 VTI1BQ9UEU0 232 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 CSADQ9Y600 493 aa6.27□□□□□ -1.41
ITGA4-208ENST00000476824 SORBS3O60504 671 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 SLFN14P0C7P3 912 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 TTBK2Q6IQ55 1244 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 SV2BQ7L1I2 683 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 FBXL6Q8N531 539 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 EZH1Q92800 747 aaPredicted RBP6.26□□□□□ -1.41
ITGA4-208ENST00000476824 GSX1Q9H4S2 264 aaPredicted RBP6.26□□□□□ -1.41
ITGA4-208ENST00000476824 MRS2Q9HD23 443 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 CACNA2D2Q9NY47 1150 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 DAGLAQ9Y4D2 1042 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 SAMM50Q9Y512 469 aa6.26□□□□□ -1.41
ITGA4-208ENST00000476824 DCDC2CA8MYV0 355 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 NEFMP07197 916 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 HCLS1P14317 486 aaPredicted RBP6.25□□□□□ -1.41
ITGA4-208ENST00000476824 ADMP35318 185 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 CDK8P49336 464 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 TTLL4Q14679 1199 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 TAF1CQ15572 869 aaPredicted RBP6.25□□□□□ -1.41
ITGA4-208ENST00000476824 ZC3H12AQ5D1E8 599 aaKnown RBP6.25□□□□□ -1.41
ITGA4-208ENST00000476824 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.25□□□□□ -1.41
ITGA4-208ENST00000476824 SHKBP1Q8TBC3 707 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 PCDHB5Q9Y5E4 795 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 SYNGAP1Q96PV0 1343 aa6.25□□□□□ -1.41
ITGA4-208ENST00000476824 TRIM37O94972 964 aa6.24□□□□□ -1.41
ITGA4-208ENST00000476824 TGFB1P01137 390 aa6.24□□□□□ -1.41
ITGA4-208ENST00000476824 PAOXQ6QHF9 649 aa6.24□□□□□ -1.41
ITGA4-208ENST00000476824 C12orf40Q86WS4 652 aa6.24□□□□□ -1.41
ITGA4-208ENST00000476824 ZDHHC13Q8IUH4 622 aa6.24□□□□□ -1.41
ITGA4-208ENST00000476824 GAL3ST3Q96A11 431 aa6.24□□□□□ -1.41
ITGA4-208ENST00000476824 CRELD1Q96HD1 420 aa6.24□□□□□ -1.41
ITGA4-208ENST00000476824 DBNDD2Q9BQY9 259 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms