RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 ECEL1O95672 775 aa9.7□□□□□ -0.86
NUP58-209ENST00000476553 MESP2Q0VG99 397 aa9.7□□□□□ -0.86
NUP58-209ENST00000476553 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
NUP58-209ENST00000476553 CILP2Q8IUL8 1156 aa9.7□□□□□ -0.86
NUP58-209ENST00000476553 LRRN4CLQ8ND94 238 aa9.7□□□□□ -0.86
NUP58-209ENST00000476553 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
NUP58-209ENST00000476553 GRIA4P48058 902 aa9.69□□□□□ -0.86
NUP58-209ENST00000476553 BHLHE22Q8NFJ8 381 aaPredicted RBP9.69□□□□□ -0.86
NUP58-209ENST00000476553 TCF12Q99081 682 aa9.69□□□□□ -0.86
NUP58-209ENST00000476553 RAD18Q9NS91 495 aa9.69□□□□□ -0.86
NUP58-209ENST00000476553 B3GALT4O96024 378 aa9.68□□□□□ -0.86
NUP58-209ENST00000476553 WDR18Q9BV38 432 aa9.68□□□□□ -0.86
NUP58-209ENST00000476553 U3KQE9 123 aa9.68□□□□□ -0.86
NUP58-209ENST00000476553 AOC2O75106 756 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 NPR3P17342 541 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 USP5P45974 858 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 PRKCQQ04759 706 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 FAM181AQ8N9Y4 354 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 CORO1BQ9BR76 489 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 ZFYVE28Q9HCC9 887 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 VAV3Q9UKW4 847 aa9.67□□□□□ -0.86
NUP58-209ENST00000476553 SPRED3Q2MJR0 410 aa9.66□□□□□ -0.86
NUP58-209ENST00000476553 GTF3C2Q8WUA4 911 aaPredicted RBP9.66□□□□□ -0.86
NUP58-209ENST00000476553 SLC38A3Q99624 504 aa9.66□□□□□ -0.86
NUP58-209ENST00000476553 A0A1W2PP55 124 aa9.65□□□□□ -0.86
NUP58-209ENST00000476553 FAM87AP0C7U9 286 aa9.65□□□□□ -0.86
NUP58-209ENST00000476553 CD96P40200 585 aa9.65□□□□□ -0.86
NUP58-209ENST00000476553 GJD3Q8N144 294 aa9.65□□□□□ -0.86
NUP58-209ENST00000476553 CCER1Q8TC90 406 aaPredicted RBP9.65□□□□□ -0.86
NUP58-209ENST00000476553 LGR6Q9HBX8 967 aa9.65□□□□□ -0.86
NUP58-209ENST00000476553 PPP1R9AQ9ULJ8 1098 aa9.65□□□□□ -0.86
NUP58-209ENST00000476553 CDK5R2Q13319 367 aa9.64□□□□□ -0.87
NUP58-209ENST00000476553 FLAD1Q8NFF5 587 aa9.64□□□□□ -0.87
NUP58-209ENST00000476553 FAM84AQ96KN4 292 aa9.64□□□□□ -0.87
NUP58-209ENST00000476553 LIN7BQ9HAP6 207 aa9.64□□□□□ -0.87
NUP58-209ENST00000476553 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
NUP58-209ENST00000476553 TMPRSS2O15393 492 aa9.63□□□□□ -0.87
NUP58-209ENST00000476553 FZD6O60353 706 aa9.63□□□□□ -0.87
NUP58-209ENST00000476553 POLR3DP05423 398 aaPredicted RBP9.63□□□□□ -0.87
NUP58-209ENST00000476553 MTMR3Q13615 1198 aa9.63□□□□□ -0.87
NUP58-209ENST00000476553 LCE5AQ5TCM9 118 aa9.63□□□□□ -0.87
NUP58-209ENST00000476553 GALNT12Q8IXK2 581 aa9.63□□□□□ -0.87
NUP58-209ENST00000476553 PI4K2BQ8TCG2 481 aa9.63□□□□□ -0.87
NUP58-209ENST00000476553 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
NUP58-209ENST00000476553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.63□□□□□ -0.87
NUP58-209ENST00000476553 IFI16Q16666 785 aaKnown RBP9.62□□□□□ -0.87
NUP58-209ENST00000476553 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
NUP58-209ENST00000476553 ZNF576Q9H609 170 aa9.62□□□□□ -0.87
NUP58-209ENST00000476553 CRIM1Q9NZV1 1036 aa9.61□□□□□ -0.87
NUP58-209ENST00000476553 CEACAM5P06731 702 aa9.6□□□□□ -0.87
NUP58-209ENST00000476553 ITPKAP23677 461 aa9.6□□□□□ -0.87
NUP58-209ENST00000476553 PDE3AQ14432 1141 aa9.6□□□□□ -0.87
NUP58-209ENST00000476553 HRASLS5Q96KN8 279 aa9.6□□□□□ -0.87
NUP58-209ENST00000476553 OXCT1P55809 520 aa9.59□□□□□ -0.87
NUP58-209ENST00000476553 AP3B2Q13367 1082 aa9.59□□□□□ -0.87
NUP58-209ENST00000476553 SLC23A3Q6PIS1 610 aa9.59□□□□□ -0.87
NUP58-209ENST00000476553 ZSWIM9Q86XI8 627 aa9.59□□□□□ -0.87
NUP58-209ENST00000476553 C1QL4Q86Z23 238 aa9.59□□□□□ -0.87
NUP58-209ENST00000476553 LRRC10BA6NIK2 292 aa9.58□□□□□ -0.88
NUP58-209ENST00000476553 AOC3Q16853 763 aa9.58□□□□□ -0.88
NUP58-209ENST00000476553 ANGEL2Q5VTE6 544 aaKnown RBP9.58□□□□□ -0.88
NUP58-209ENST00000476553 PLAGL2Q9UPG8 496 aa9.58□□□□□ -0.88
NUP58-209ENST00000476553 ZNF503-AS2A6NEH8 195 aa9.57□□□□□ -0.88
NUP58-209ENST00000476553 FAM13AO94988 1023 aa9.57□□□□□ -0.88
NUP58-209ENST00000476553 TSPAN15O95858 294 aa9.57□□□□□ -0.88
NUP58-209ENST00000476553 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
NUP58-209ENST00000476553 ATXN3LQ9H3M9 355 aa9.57□□□□□ -0.88
NUP58-209ENST00000476553 PCDHGC5Q9Y5F6 944 aa9.57□□□□□ -0.88
NUP58-209ENST00000476553 TMEM265A0A087WTH1 108 aa9.56□□□□□ -0.88
NUP58-209ENST00000476553 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
NUP58-209ENST00000476553 AAMPQ13685 434 aa9.56□□□□□ -0.88
NUP58-209ENST00000476553 KIAA0319Q5VV43 1072 aa9.56□□□□□ -0.88
NUP58-209ENST00000476553 TOX2Q96NM4 488 aa9.56□□□□□ -0.88
NUP58-209ENST00000476553 TNKS2Q9H2K2 1166 aa9.56□□□□□ -0.88
NUP58-209ENST00000476553 PIDD1Q9HB75 910 aa9.56□□□□□ -0.88
NUP58-209ENST00000476553 FAM53CQ9NYF3 392 aa9.56□□□□□ -0.88
NUP58-209ENST00000476553 LEFTY1O75610 366 aa9.55□□□□□ -0.88
NUP58-209ENST00000476553 LCNL1Q6ZST4 164 aa9.55□□□□□ -0.88
NUP58-209ENST00000476553 SMYD4Q8IYR2 804 aaPredicted RBP9.55□□□□□ -0.88
NUP58-209ENST00000476553 WDR89Q96FK6 387 aaPredicted RBP9.55□□□□□ -0.88
NUP58-209ENST00000476553 DUSP23Q9BVJ7 150 aa9.55□□□□□ -0.88
NUP58-209ENST00000476553 CCDC86Q9H6F5 360 aaKnown RBP9.55□□□□□ -0.88
NUP58-209ENST00000476553 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
NUP58-209ENST00000476553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.54□□□□□ -0.88
NUP58-209ENST00000476553 CFPP27918 469 aa9.54□□□□□ -0.88
NUP58-209ENST00000476553 ID3Q02535 119 aa9.54□□□□□ -0.88
NUP58-209ENST00000476553 PTPN12Q05209 780 aaKnown RBP9.54□□□□□ -0.88
NUP58-209ENST00000476553 LIG1P18858 919 aa9.53□□□□□ -0.88
NUP58-209ENST00000476553 SSFA2P28290 1259 aa9.53□□□□□ -0.88
NUP58-209ENST00000476553 RAP1GAPP47736 663 aa9.53□□□□□ -0.88
NUP58-209ENST00000476553 DISC1Q9NRI5 854 aa9.53□□□□□ -0.88
NUP58-209ENST00000476553 ZNF862O60290 1169 aa9.52□□□□□ -0.89
NUP58-209ENST00000476553 KCNMB1Q16558 191 aa9.52□□□□□ -0.89
NUP58-209ENST00000476553 MLANAQ16655 118 aa9.52□□□□□ -0.89
NUP58-209ENST00000476553 KIF4BQ2VIQ3 1234 aa9.52□□□□□ -0.89
NUP58-209ENST00000476553 CCDC9Q9Y3X0 531 aaKnown RBP9.52□□□□□ -0.89
NUP58-209ENST00000476553 NCANO14594 1321 aa9.52□□□□□ -0.89
NUP58-209ENST00000476553 SF3B2Q13435 895 aaKnown RBP9.51□□□□□ -0.89
NUP58-209ENST00000476553 PPP1R16BQ96T49 567 aa9.51□□□□□ -0.89
NUP58-209ENST00000476553 PRDM7Q9NQW5 492 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms