RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CLIC4Q9Y696 253 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 EP400Q96L91 3159 aa19.43■□□□□ 0.7
TVP23B-202ENST00000476139 BCL9LQ86UU0 1499 aa19.42■□□□□ 0.7
TVP23B-202ENST00000476139 KIF28PB7ZC32 967 aa19.42■□□□□ 0.7
TVP23B-202ENST00000476139 SNW1Q13573 536 aaKnown RBP19.42■□□□□ 0.7
TVP23B-202ENST00000476139 ALX1Q15699 326 aa19.42■□□□□ 0.7
TVP23B-202ENST00000476139 RBM43Q6ZSC3 357 aaKnown RBP19.42■□□□□ 0.7
TVP23B-202ENST00000476139 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
TVP23B-202ENST00000476139 ZNF396Q96N95 335 aaPredicted RBP19.42■□□□□ 0.7
TVP23B-202ENST00000476139 ARID3AQ99856 593 aa19.42■□□□□ 0.7
TVP23B-202ENST00000476139 ZKSCAN3Q9BRR0 538 aa19.42■□□□□ 0.7
TVP23B-202ENST00000476139 SMIM22K7EJ46 135 aa19.42■□□□□ 0.7
TVP23B-202ENST00000476139 RRP12Q5JTH9 1297 aaKnown RBP19.42■□□□□ 0.7
TVP23B-202ENST00000476139 NFXL1Q6ZNB6 911 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 FAM200AQ8TCP9 573 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 LY9Q9HBG7 655 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 TAF1P21675 1872 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 TMEM67Q5HYA8 995 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 SDR42E1Q8WUS8 393 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 TOMM22Q9NS69 142 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 PCDHA7Q9UN72 937 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 A0A087WWV3 80 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 TDO2P48775 406 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 SF3B3Q15393 1217 aaKnown RBP19.41■□□□□ 0.7
TVP23B-202ENST00000476139 VPS72Q15906 364 aa19.41■□□□□ 0.7
TVP23B-202ENST00000476139 ERCC4Q92889 916 aaPredicted RBP19.41■□□□□ 0.7
TVP23B-202ENST00000476139 CYP7A1P22680 504 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 BSDC1Q9NW68 430 aaPredicted RBP19.4■□□□□ 0.7
TVP23B-202ENST00000476139 ZMYM6O95789 1325 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 RREB1Q92766 1687 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 UBAP1LF5GYI3 381 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 KLRK1P26718 216 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 AKNAD1Q5T1N1 836 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 DNAJC25Q9H1X3 360 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 CBX8Q9HC52 389 aa19.4■□□□□ 0.7
TVP23B-202ENST00000476139 FAM217BQ9NTX9 383 aaPredicted RBP19.4■□□□□ 0.7
TVP23B-202ENST00000476139 IFIT3O14879 490 aaKnown RBP19.39■□□□□ 0.7
TVP23B-202ENST00000476139 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.7
TVP23B-202ENST00000476139 MFSD6Q6ZSS7 791 aa19.39■□□□□ 0.7
TVP23B-202ENST00000476139 KLHL34Q8N239 644 aa19.39■□□□□ 0.7
TVP23B-202ENST00000476139 TMEM87BQ96K49 555 aa19.39■□□□□ 0.7
TVP23B-202ENST00000476139 RAI14Q9P0K7 980 aa19.39■□□□□ 0.7
TVP23B-202ENST00000476139 ATL3Q6DD88 541 aa19.39■□□□□ 0.69
TVP23B-202ENST00000476139 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
TVP23B-202ENST00000476139 RTEL1Q9NZ71 1219 aa19.39■□□□□ 0.69
TVP23B-202ENST00000476139 GNPATO15228 680 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 ZBTB43O43298 467 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 RRP9O43818 475 aaKnown RBP19.38■□□□□ 0.69
TVP23B-202ENST00000476139 A0A1B0GVL5 298 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 NTRK3Q16288 839 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 VPS37DQ86XT2 251 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 ENGASEQ8NFI3 743 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 TSC1Q92574 1164 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 FAM84BQ96KN1 310 aaPredicted RBP19.38■□□□□ 0.69
TVP23B-202ENST00000476139 ALG1Q9BT22 464 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 ARAP2Q8WZ64 1704 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 RANBP6O60518 1105 aaKnown RBP19.38■□□□□ 0.69
TVP23B-202ENST00000476139 KIF23Q02241 960 aaPredicted RBP19.38■□□□□ 0.69
TVP23B-202ENST00000476139 NOLC1Q14978 699 aaKnown RBP eCLIP19.38■□□□□ 0.69
TVP23B-202ENST00000476139 MYSM1Q5VVJ2 828 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 FSIP1Q8NA03 581 aa19.38■□□□□ 0.69
TVP23B-202ENST00000476139 ZNF804BA4D1E1 1349 aa19.37■□□□□ 0.69
TVP23B-202ENST00000476139 SETDB2Q96T68 719 aa19.37■□□□□ 0.69
TVP23B-202ENST00000476139 NACAP1Q9BZK3 213 aa19.37■□□□□ 0.69
TVP23B-202ENST00000476139 SLC12A7Q9Y666 1083 aa19.37■□□□□ 0.69
TVP23B-202ENST00000476139 PNPLA7Q6ZV29 1317 aa19.37■□□□□ 0.69
TVP23B-202ENST00000476139 MINDY4BA8MYZ0 360 aa19.37■□□□□ 0.69
TVP23B-202ENST00000476139 SGMS1Q86VZ5 419 aa19.37■□□□□ 0.69
TVP23B-202ENST00000476139 ZNF165P49910 485 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 UBE4AQ14139 1066 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 CCDC73Q6ZRK6 1079 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 CCDC82Q8N4S0 544 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 CNTNAP4Q9C0A0 1308 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 COL1A1P02452 1464 aaPredicted RBP19.36■□□□□ 0.69
TVP23B-202ENST00000476139 GOLGA8AA7E2F4 631 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 STK38Q15208 465 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 CAVIN4Q5BKX8 364 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 NBPF5PQ86XG9 351 aaPredicted RBP19.36■□□□□ 0.69
TVP23B-202ENST00000476139 CMTR1Q8N1G2 835 aaKnown RBP19.36■□□□□ 0.69
TVP23B-202ENST00000476139 ZNF384Q8TF68 577 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 NARFQ9UHQ1 456 aa19.36■□□□□ 0.69
TVP23B-202ENST00000476139 GNAT2P19087 354 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 FAM160A1Q05DH4 1040 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 SF3A1Q15459 793 aaKnown RBP19.35■□□□□ 0.69
TVP23B-202ENST00000476139 ADALQ6DHV7 355 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 SLC51AQ86UW1 340 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 COL5A3P25940 1745 aaPredicted RBP19.35■□□□□ 0.69
TVP23B-202ENST00000476139 RPS6KA4O75676 772 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 LIFRP42702 1097 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 NDUFA8P51970 172 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 DYNLL1P63167 89 aaKnown RBP19.35■□□□□ 0.69
TVP23B-202ENST00000476139 SLC10A5Q5PT55 438 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 KRT40Q6A162 431 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 TFCP2L1Q9NZI6 479 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 USP21Q9UK80 565 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 PYCARDQ9ULZ3 195 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 CCDC69A6NI79 296 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 ZPR1O75312 459 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 IARSP41252 1262 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms