RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PHACTR1Q9C0D0 580 aa5.79□□□□□ -1.48
VPS13D-206ENST00000476045 MARK1Q9P0L2 795 aa5.79□□□□□ -1.48
VPS13D-206ENST00000476045 NCAPD2Q15021 1401 aa5.79□□□□□ -1.48
VPS13D-206ENST00000476045 ZNF831Q5JPB2 1677 aa5.79□□□□□ -1.48
VPS13D-206ENST00000476045 ITGB4P16144 1822 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 CNTNAP5Q8WYK1 1306 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 EXOC5O00471 708 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 KHNYNO15037 678 aaKnown RBP5.78□□□□□ -1.48
VPS13D-206ENST00000476045 ITGB2P05107 769 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 SNRPNP63162 240 aaKnown RBP5.78□□□□□ -1.48
VPS13D-206ENST00000476045 TYRO3Q06418 890 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 DPYDQ12882 1025 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 LINC00114Q6XXX2 140 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 NME9Q86XW9 330 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS13D-206ENST00000476045 BEND7Q8N7W2 519 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-206ENST00000476045 GALNT6Q8NCL4 622 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 NEDD1Q8NHV4 660 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 RHPN1Q8TCX5 695 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 ANKRD24Q8TF21 1146 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 ZNF232Q9UNY5 417 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 TOGARAM1Q9Y4F4 1720 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 MEGF6O75095 1541 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 NSD2O96028 1365 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 MAP3K5Q99683 1374 aa5.78□□□□□ -1.48
VPS13D-206ENST00000476045 NSD3Q9BZ95 1437 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 ST20-MTHFSA0A0A6YYL1 179 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 PPP1R12BO60237 982 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-206ENST00000476045 IGHA1P01876 353 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 WEE1P30291 646 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 ELOAQ14241 798 aaKnown RBP5.77□□□□□ -1.49
VPS13D-206ENST00000476045 BICDL1Q6ZP65 573 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 PODNQ7Z5L7 613 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 KCTD17Q8N5Z5 321 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 MARCH10Q8NA82 808 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-206ENST00000476045 IP6K1Q92551 441 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 DCAF5Q96JK2 942 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 ZMYND15Q9H091 742 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 VRTNQ9H8Y1 702 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 SPON1Q9HCB6 807 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 NLRP2Q9NX02 1062 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 MKL2Q9ULH7 1088 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 CHMP3Q9Y3E7 222 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 INSRP06213 1382 aa5.77□□□□□ -1.49
VPS13D-206ENST00000476045 CICQ96RK0 1608 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-206ENST00000476045 GOLGB1Q14789 3259 aaKnown RBP5.77□□□□□ -1.49
VPS13D-206ENST00000476045 MAP3K19Q56UN5 1328 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 ADARB2-AS1A8MUL3 147 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 SIN3BO75182 1162 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 LMOD1P29536 600 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-206ENST00000476045 HIF1AQ16665 826 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 RTN1Q16799 776 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 LRRC69Q6ZNQ3 347 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 ALDH16A1Q8IZ83 802 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 TNFRSF25Q93038 417 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 BTBD6Q96KE9 485 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 SUSD3Q96L08 255 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 SLC12A5Q9H2X9 1139 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 STK32BQ9NY57 414 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 ANKIB1Q9P2G1 1089 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 PPP1R1BQ9UD71 204 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-206ENST00000476045 RBM19Q9Y4C8 960 aaKnown RBP5.76□□□□□ -1.49
VPS13D-206ENST00000476045 GJA3Q9Y6H8 435 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 UBR3Q6ZT12 1888 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 UTRNP46939 3433 aa5.76□□□□□ -1.49
VPS13D-206ENST00000476045 PCDH11XQ9BZA7 1347 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 PCDH11YQ9BZA8 1340 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 NEURL1BA8MQ27 555 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 KCNQ2O43526 872 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 HOXC9P31274 260 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 AMPHP49418 695 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 SCG3Q8WXD2 468 aaKnown RBP5.75□□□□□ -1.49
VPS13D-206ENST00000476045 MYO19Q96H55 970 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 HSH2DQ96JZ2 352 aa5.75□□□□□ -1.49
VPS13D-206ENST00000476045 DMGDHQ9UI17 866 aaKnown RBP5.75□□□□□ -1.49
VPS13D-206ENST00000476045 VIRMAQ69YN4 1812 aaKnown RBP5.75□□□□□ -1.49
VPS13D-206ENST00000476045 C4BP0C0L5 1744 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 TGFBR3LH3BV60 316 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 COL8A1P27658 744 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 TXNRD1Q16881 649 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 SWI5Q1ZZU3 235 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 CHSY3Q70JA7 882 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 ZNF280CQ8ND82 737 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 MTFR1LQ9H019 292 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 EFCC1Q9HA90 598 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 PRDM6Q9NQX0 595 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 ZMIZ1Q9ULJ6 1067 aa5.74□□□□□ -1.49
VPS13D-206ENST00000476045 COL5A3P25940 1745 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-206ENST00000476045 ELOA3CA0A087WX78 387 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-206ENST00000476045 ELOA3DA6NLF2 546 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-206ENST00000476045 PIK3R2O00459 728 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 GNB5O14775 395 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 SFSWAPQ12872 951 aaKnown RBP5.73□□□□□ -1.49
VPS13D-206ENST00000476045 GRIN2CQ14957 1233 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 SLC15A2Q16348 729 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 PLA2G4EQ3MJ16 856 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 ELOA3BQ3SY89 546 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 BTLAQ7Z6A9 289 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 ELOA3Q8NG57 546 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 RAPGEF4Q8WZA2 1011 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms