RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 SSBP05455 408 aaKnown RBP eCLIP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 CTNNA2P26232 953 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 INPP5BP32019 993 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 CYLC1P35663 651 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 CETN1Q12798 172 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 TNNI3KQ59H18 835 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 METTL24Q5JXM2 366 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 LRCH2Q5VUJ6 765 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 RAB3IL1Q8TBN0 382 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ZFP91Q96JP5 570 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 METTL22Q9BUU2 404 aaPredicted RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 FPGT-TNNI3KV9GXZ4 949 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 STMN1P16949 149 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 SPAG1Q07617 926 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 KANK3Q6NY19 840 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 DHX32Q7L7V1 743 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 LRRC45Q96CN5 670 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 NCOA5Q9HCD5 579 aaKnown RBP6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 PAG1Q9NWQ8 432 aa6.92□□□□□ -1.3
HNRNPU-208ENST00000475997 ZNF213O14771 459 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 SKILP12757 684 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC82Q8N4S0 544 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 RAB34Q9BZG1 259 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 PTPDC1A2A3K4 754 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 SASH1O94885 1247 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 MAP7Q14244 749 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 ZNF365Q70YC5 407 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 HDXQ7Z353 690 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 SELENOOQ9BVL4 669 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 VPS18Q9P253 973 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 DNAI1Q9UI46 699 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC196A0A1B0GTZ2 297 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 NEURL1BA8MQ27 555 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 ATP2A1O14983 1001 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC172P0C7W6 258 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 GPTP24298 496 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 VAV2P52735 878 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 SF3B2Q13435 895 aaKnown RBP6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 MAP7D1Q3KQU3 841 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 PAXIP1Q6ZW49 1069 aaPredicted RBP6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 ZNF622Q969S3 477 aaKnown RBP eCLIP6.91□□□□□ -1.37e-15■■□□□ 11.6
HNRNPU-208ENST00000475997 AKAP2Q9Y2D5 859 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 KLF18A0A0U1RQI7 1052 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 IFIT5Q13325 482 aaKnown RBP6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 MYRIPQ8NFW9 859 aa6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
HNRNPU-208ENST00000475997 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.91□□□□□ -1.32e-11■■■□□ 15.7
HNRNPU-208ENST00000475997 GBP1P32455 592 aa6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 NECTIN1Q15223 517 aa6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 CTAGE1Q96RT6 745 aa6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.9□□□□□ -1.32e-13■□□□□ 8.2
HNRNPU-208ENST00000475997 CIB2O75838 187 aa6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 IL15P40933 162 aaPredicted RBP6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 TPD52P55327 224 aaPredicted RBP6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 KLHL10Q6JEL2 608 aa6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 ZNF589Q86UQ0 364 aaPredicted RBP6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 UBAC1Q9BSL1 405 aa6.9□□□□□ -1.3
HNRNPU-208ENST00000475997 MACROD2A1Z1Q3 448 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 AKR1B10O60218 316 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 NR1I2O75469 434 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 TUBB2AQ13885 445 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 LDHAL6AQ6ZMR3 332 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 KRBA2Q6ZNG9 492 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 PHLDB2Q86SQ0 1253 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 AOPEPQ8N6M6 819 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 CNNM3Q8NE01 707 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 ERO1AQ96HE7 468 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 ZNF594Q96JF6 807 aaPredicted RBP6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 DRC1Q96MC2 740 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 TUBB2BQ9BVA1 445 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 KDRP35968 1356 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 CTAGE9A4FU28 777 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 ATP5JP18859 108 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 GCKP35557 465 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 NEDD9Q14511 834 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 OTUD7BQ6GQQ9 843 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 INTS8Q75QN2 995 aaKnown RBP6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 ARHGAP24Q8N264 748 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 ZSWIM4Q9H7M6 989 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 SERPINA10Q9UK55 444 aa6.9□□□□□ -1.31
HNRNPU-208ENST00000475997 A0A1B0GVL5 298 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 RIOK3O14730 519 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 BUB1BO60566 1050 aaPredicted RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 TAF5LO75529 589 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 LRMPQ12912 555 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 ZMAT2Q96NC0 199 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 CLSTN2Q9H4D0 955 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 SLC52A2Q9HAB3 445 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 FAM114A2Q9NRY5 505 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 USP31Q70CQ4 1352 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 TMEM131LA2VDJ0 1609 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 MTIF2P46199 727 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 CROCCP2Q86T23 111 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 MICU3Q86XE3 530 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 KBTBD3Q8NAB2 608 aa6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 MRPS27Q92552 414 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-208ENST00000475997 AIDAQ96BJ3 306 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms