RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 TTC6Q86TZ1 520 aa18.02■□□□□ 0.47
RPUSD3-215ENST00000475470 RAB11FIP4Q86YS3 637 aa18.02■□□□□ 0.47
RPUSD3-215ENST00000475470 TFIP11Q9UBB9 837 aaKnown RBP18.02■□□□□ 0.47
RPUSD3-215ENST00000475470 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 ELP1O95163 1332 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 KDM4AO75164 1064 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 TXNRD1Q16881 649 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 CCDC183Q5T5S1 534 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 SDR42E1Q8WUS8 393 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 SPATA32Q96LK8 384 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 TOMM22Q9NS69 142 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 LEMD3Q9Y2U8 911 aa18.01■□□□□ 0.47
RPUSD3-215ENST00000475470 CHD4Q14839 1912 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 FDPSP14324 419 aaKnown RBP18■□□□□ 0.47
RPUSD3-215ENST00000475470 TMEM67Q5HYA8 995 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 NFXL1Q6ZNB6 911 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 TXNRD3Q86VQ6 643 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 RIOK1Q9BRS2 568 aaKnown RBP18■□□□□ 0.47
RPUSD3-215ENST00000475470 CACNA1SQ13698 1873 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 MYH13Q9UKX3 1938 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 RRP12Q5JTH9 1297 aaKnown RBP18■□□□□ 0.47
RPUSD3-215ENST00000475470 RBSNQ9H1K0 784 aa18■□□□□ 0.47
RPUSD3-215ENST00000475470 RNF41Q9H4P4 317 aaPredicted RBP18■□□□□ 0.47
RPUSD3-215ENST00000475470 METAP2P50579 478 aaKnown RBP eCLIP17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 PPARAQ07869 468 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 NSUN4Q96CB9 384 aaKnown RBP17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 EP400Q96L91 3159 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 IFIT3O14879 490 aaKnown RBP17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 DYNLL1P63167 89 aaKnown RBP17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 MECOMQ03112 1051 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 APOA5Q6Q788 366 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 STK11IPQ8N1F8 1099 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 ZNF384Q8TF68 577 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 ANP32BQ92688 251 aaKnown RBP17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 CFAP45Q9UL16 551 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 TACC3Q9Y6A5 838 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 XDHP47989 1333 aa17.99■□□□□ 0.47
RPUSD3-215ENST00000475470 GOLGA6L4A6NEF3 574 aa17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 RBM6P78332 1123 aaKnown RBP17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 GUCY1B3Q02153 619 aa17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 PROM2Q8N271 834 aa17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 LEO1Q8WVC0 666 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 RBM17Q96I25 401 aaKnown RBP17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 LIFRP42702 1097 aa17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 CRY2Q49AN0 593 aa17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 SENP2Q9HC62 589 aa17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 IRS2Q9Y4H2 1338 aa17.98■□□□□ 0.47
RPUSD3-215ENST00000475470 ZBTB43O43298 467 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 C8orf76Q96K31 380 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 TSPY26PQ9H489 355 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 CCDC69A6NI79 296 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 CDKL5O76039 1030 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 PRDX5P30044 214 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 SPTY2D1Q68D10 685 aaPredicted RBP17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 CPLX2Q6PUV4 134 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 MICU3Q86XE3 530 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 BRIP1Q9BX63 1249 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 JAG2Q9Y219 1238 aa17.97■□□□□ 0.47
RPUSD3-215ENST00000475470 RXRAP19793 462 aa17.96■□□□□ 0.47
RPUSD3-215ENST00000475470 SLC51AQ86UW1 340 aa17.96■□□□□ 0.47
RPUSD3-215ENST00000475470 ANAPC4Q9UJX5 808 aa17.96■□□□□ 0.47
RPUSD3-215ENST00000475470 SLC12A7Q9Y666 1083 aa17.96■□□□□ 0.47
RPUSD3-215ENST00000475470 ERICH2A1L162 156 aa17.96■□□□□ 0.46
RPUSD3-215ENST00000475470 ZBTB22O15209 634 aa17.96■□□□□ 0.46
RPUSD3-215ENST00000475470 ADD1P35611 737 aaKnown RBP17.96■□□□□ 0.46
RPUSD3-215ENST00000475470 DDR1Q08345 913 aa17.96■□□□□ 0.46
RPUSD3-215ENST00000475470 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.46
RPUSD3-215ENST00000475470 POLRMTO00411 1230 aaKnown RBP17.95■□□□□ 0.46
RPUSD3-215ENST00000475470 GPSM2P81274 684 aa17.95■□□□□ 0.46
RPUSD3-215ENST00000475470 TMED8Q6PL24 325 aaPredicted RBP17.95■□□□□ 0.46
RPUSD3-215ENST00000475470 ZNF804AQ7Z570 1209 aa17.95■□□□□ 0.46
RPUSD3-215ENST00000475470 DZIP1Q86YF9 867 aaKnown RBP17.95■□□□□ 0.46
RPUSD3-215ENST00000475470 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.46
RPUSD3-215ENST00000475470 GOLGA8AA7E2F4 631 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 WTAPQ15007 396 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 GIMAP6Q6P9H5 292 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 CCDC144CPQ8IYA2 1237 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 WDR66Q8TBY9 1149 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 ESR2Q92731 530 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 MTA3Q9BTC8 594 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 MYL10Q9BUA6 226 aa17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 CRNKL1Q9BZJ0 848 aaKnown RBP17.94■□□□□ 0.46
RPUSD3-215ENST00000475470 BBOX1O75936 387 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 CDC27P30260 824 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 CEBPZQ03701 1054 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms