RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
IMP4-214ENST00000475074 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
IMP4-214ENST00000475074 ZNF541Q9H0D2 1346 aa13.23□□□□□ -0.29
IMP4-214ENST00000475074 CHGBP05060 677 aa13.23□□□□□ -0.29
IMP4-214ENST00000475074 HSPD1P10809 573 aaKnown RBP13.23□□□□□ -0.29
IMP4-214ENST00000475074 BTDP43251 543 aa13.23□□□□□ -0.29
IMP4-214ENST00000475074 FKBP1CQ5VVH2 108 aa13.23□□□□□ -0.29
IMP4-214ENST00000475074 APOBEC3HQ6NTF7 200 aaKnown RBP13.23□□□□□ -0.29
IMP4-214ENST00000475074 ZBED3Q96IU2 234 aaPredicted RBP13.23□□□□□ -0.29
IMP4-214ENST00000475074 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
IMP4-214ENST00000475074 NACAP1Q9BZK3 213 aa13.23□□□□□ -0.29
IMP4-214ENST00000475074 IL25Q9H293 177 aa13.23□□□□□ -0.29
IMP4-214ENST00000475074 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
IMP4-214ENST00000475074 F8W031 263 aaPredicted RBP13.22□□□□□ -0.29
IMP4-214ENST00000475074 H7C1D1 291 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 SEC24BO95487 1268 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 MCCP23508 829 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
IMP4-214ENST00000475074 ANAPC15P60006 121 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 CFAP100Q494V2 611 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 MIGA1Q8NAN2 632 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 DDRGK1Q96HY6 314 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 ARMT1Q9H993 441 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 AATFQ9NY61 560 aaKnown RBP eCLIP13.22□□□□□ -0.29
IMP4-214ENST00000475074 GPRC5DQ9NZD1 345 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 CNOT7Q9UIV1 285 aaKnown RBP13.22□□□□□ -0.29
IMP4-214ENST00000475074 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
IMP4-214ENST00000475074 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
IMP4-214ENST00000475074 GLTPD2A6NH11 291 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 GSG1L2A8MUP6 293 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 MYO1BO43795 1136 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 RBM25P49756 843 aaKnown RBP13.21□□□□□ -0.29
IMP4-214ENST00000475074 NT5C2P49902 561 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 SCNN1DP51172 638 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 RHBDL3P58872 404 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 SLFNL1Q499Z3 407 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 RNF20Q5VTR2 975 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 IFNL3Q8IZI9 196 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 LCORLQ8N3X6 602 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 KCNB2Q92953 911 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 IDI2Q9BXS1 227 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 MYOZ2Q9NPC6 264 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.29
IMP4-214ENST00000475074 HSPA4P34932 840 aa13.2□□□□□ -0.3
IMP4-214ENST00000475074 DYNLL1P63167 89 aaKnown RBP13.2□□□□□ -0.3
IMP4-214ENST00000475074 NECTIN1Q15223 517 aa13.2□□□□□ -0.3
IMP4-214ENST00000475074 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
IMP4-214ENST00000475074 SBK1Q52WX2 424 aa13.2□□□□□ -0.3
IMP4-214ENST00000475074 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
IMP4-214ENST00000475074 MKRN1Q9UHC7 482 aaKnown RBP13.2□□□□□ -0.3
IMP4-214ENST00000475074 COL2A1P02458 1487 aaPredicted RBP13.2□□□□□ -0.3
IMP4-214ENST00000475074 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
IMP4-214ENST00000475074 SCN4AP35499 1836 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 ECM29Q5VYK3 1845 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 FOXP2O15409 715 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 ENTPD3O75355 529 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 FGAP02671 866 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 LMOD1P29536 600 aaPredicted RBP13.19□□□□□ -0.3
IMP4-214ENST00000475074 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
IMP4-214ENST00000475074 PTH1RQ03431 593 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 CDC42EP5Q6NZY7 148 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 TEX11Q8IYF3 940 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 SH3RF3Q8TEJ3 882 aaPredicted RBP13.19□□□□□ -0.3
IMP4-214ENST00000475074 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
IMP4-214ENST00000475074 TBC1D32Q96NH3 1257 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 DCP1AQ9NPI6 582 aaPredicted RBP13.19□□□□□ -0.3
IMP4-214ENST00000475074 ADARB2Q9NS39 739 aaKnown RBP13.19□□□□□ -0.3
IMP4-214ENST00000475074 USP40Q9NVE5 1235 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 TMOD2Q9NZR1 351 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
IMP4-214ENST00000475074 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
IMP4-214ENST00000475074 WNT10BO00744 389 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 DDNO94850 711 aaPredicted RBP13.18□□□□□ -0.3
IMP4-214ENST00000475074 APPP05067 770 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 PCP11498 1178 aaKnown RBP13.18□□□□□ -0.3
IMP4-214ENST00000475074 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
IMP4-214ENST00000475074 KRT32Q14532 448 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 IMMTQ16891 758 aaKnown RBP13.18□□□□□ -0.3
IMP4-214ENST00000475074 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 NAPBQ9H115 298 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
IMP4-214ENST00000475074 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
IMP4-214ENST00000475074 CDK5RAP2Q96SN8 1893 aa13.17□□□□□ -0.3
IMP4-214ENST00000475074 WDHD1O75717 1129 aaPredicted RBP13.17□□□□□ -0.3
IMP4-214ENST00000475074 USP5P45974 858 aa13.17□□□□□ -0.3
IMP4-214ENST00000475074 TDO2P48775 406 aa13.17□□□□□ -0.3
IMP4-214ENST00000475074 TNFAIP1Q13829 316 aa13.17□□□□□ -0.3
IMP4-214ENST00000475074 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
IMP4-214ENST00000475074 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
IMP4-214ENST00000475074 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms