RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 KIF3BO15066 747 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 PLIN1O60240 522 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 PRMT3O60678 531 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 AP1G2O75843 785 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 KRT18P05783 430 aaKnown RBP4.02□□□□□ -1.77
UBR3-208ENST00000474426 NOS2P35228 1153 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 POLD2P49005 469 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 PAPOLAP51003 745 aaKnown RBP4.02□□□□□ -1.77
UBR3-208ENST00000474426 SCNN1DP51172 638 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 ACAP1Q15027 740 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 STAP2Q9UGK3 403 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 RIMKLBQ9ULI2 386 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 PA2G4Q9UQ80 394 aaKnown RBP4.02□□□□□ -1.77
UBR3-208ENST00000474426 DAAM1Q9Y4D1 1078 aa4.02□□□□□ -1.77
UBR3-208ENST00000474426 HSPA1AP0DMV8 641 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 HSPA1BP0DMV9 641 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 HALP42357 657 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 HDAC4P56524 1084 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 POLR2FP61218 127 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 GABREP78334 506 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 PPP4R3AQ6IN85 833 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 ZNF710Q8N1W2 664 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 ATP11CQ8NB49 1132 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 PPHLN1Q8NEY8 458 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 RTF1Q92541 710 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 SGCDQ92629 289 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 OSBPL10Q9BXB5 764 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 PPP1R12CQ9BZL4 782 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 OGFRQ9NZT2 677 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 FBXO2Q9UK22 296 aaPredicted RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 FARP1Q9Y4F1 1045 aaPredicted RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 PCDHGB3Q9Y5G1 929 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 IQCA1LA6NCM1 817 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 CPLX1O14810 134 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 C21orf2O43822 256 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 XRCC5P13010 732 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 PLA2G4AP47712 749 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 CLCN2P51788 898 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 ICA1Q05084 483 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 SP140Q13342 867 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 BRDTQ58F21 947 aaPredicted RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 SH3D19Q5HYK7 790 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 DGKHQ86XP1 1220 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 GOLGA6L1Q8N7Z2 621 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 MIEF2Q96C03 454 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 FRMD6Q96NE9 622 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 MOGAT1Q96PD6 335 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 TSGA13Q96PP4 275 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 MTRQ99707 1265 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 SH3GL1Q99961 368 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 LRRCC1Q9C099 1032 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 TOR1BO14657 336 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 ZNF254O75437 659 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 SCGB1D2O95969 90 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 WASHC4Q2M389 1173 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 ALFQ53S48 1182 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 PRPF38BQ5VTL8 546 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 CCDC30Q5VVM6 783 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 SMYD5Q6GMV2 418 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 BEND5Q7L4P6 421 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 ARMC9Q7Z3E5 817 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 TEX9Q8N6V9 391 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 BRSK1Q8TDC3 778 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 USP6NLQ92738 828 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 DHTKD1Q96HY7 919 aaPredicted RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 TAOK3Q9H2K8 898 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 AASDHPPTQ9NRN7 309 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 PDRG1Q9NUG6 133 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 CEP72Q9P209 647 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 SSX2IPQ9Y2D8 614 aa4.01□□□□□ -1.77
UBR3-208ENST00000474426 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 LRRFIP2Q9Y608 721 aaKnown RBP4.01□□□□□ -1.77
UBR3-208ENST00000474426 RTCAO00442 366 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 KLHL41O60662 606 aa4□□□□□ -1.77
UBR3-208ENST00000474426 CLASP2O75122 1294 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 PRLRP16471 622 aa4□□□□□ -1.77
UBR3-208ENST00000474426 WEE1P30291 646 aa4□□□□□ -1.77
UBR3-208ENST00000474426 PLEKHG4Q58EX7 1191 aa4□□□□□ -1.77
UBR3-208ENST00000474426 DALRD3Q5D0E6 543 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 KANK4Q5T7N3 995 aaPredicted RBP4□□□□□ -1.77
UBR3-208ENST00000474426 NBPF15Q8N660 670 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ANKRD20A12PQ8NF67 263 aa4□□□□□ -1.77
UBR3-208ENST00000474426 GOLGA5Q8TBA6 731 aa4□□□□□ -1.77
UBR3-208ENST00000474426 NLRP3Q96P20 1036 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ATG3Q9NT62 314 aa4□□□□□ -1.77
UBR3-208ENST00000474426 SOS1Q07889 1333 aaPredicted RBP4□□□□□ -1.77
UBR3-208ENST00000474426 LRRC72A6NJI9 287 aa4□□□□□ -1.77
UBR3-208ENST00000474426 MTHFD1P11586 935 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 PRPHP41219 470 aa4□□□□□ -1.77
UBR3-208ENST00000474426 CENPAP49450 140 aa4□□□□□ -1.77
UBR3-208ENST00000474426 SARSP49591 514 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 PDE3BQ13370 1112 aa4□□□□□ -1.77
UBR3-208ENST00000474426 WDR44Q5JSH3 913 aa4□□□□□ -1.77
UBR3-208ENST00000474426 NFATC2IPQ8NCF5 419 aa4□□□□□ -1.77
UBR3-208ENST00000474426 RPGRQ92834 1020 aaKnown RBP4□□□□□ -1.77
UBR3-208ENST00000474426 ALG1Q9BT22 464 aa4□□□□□ -1.77
UBR3-208ENST00000474426 TNMDQ9H2S6 317 aa4□□□□□ -1.77
UBR3-208ENST00000474426 ANO2Q9NQ90 1003 aa4□□□□□ -1.77
UBR3-208ENST00000474426 GPRASP1Q5JY77 1395 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms