RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
VPS50-211ENST00000474412 NAA30Q147X3 362 aaPredicted RBP9.81□□□□□ -0.84
VPS50-211ENST00000474412 FCHSD1Q86WN1 690 aa9.81□□□□□ -0.84
VPS50-211ENST00000474412 PCGF6Q9BYE7 350 aa9.81□□□□□ -0.84
VPS50-211ENST00000474412 DMGDHQ9UI17 866 aaKnown RBP9.81□□□□□ -0.84
VPS50-211ENST00000474412 BTAF1O14981 1849 aa9.81□□□□□ -0.84
VPS50-211ENST00000474412 EDC4Q6P2E9 1401 aaKnown RBP9.81□□□□□ -0.84
VPS50-211ENST00000474412 TUBGCP6Q96RT7 1819 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 MICAL2O94851 1124 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 GCP02774 474 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 ARSDP51689 593 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 BHMTQ93088 406 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 SAP130Q9H0E3 1048 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 USP35Q9P2H5 1018 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 LRP5O75197 1615 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 CRB1P82279 1406 aa9.8□□□□□ -0.84
VPS50-211ENST00000474412 ST20-MTHFSA0A0A6YYL1 179 aa9.79□□□□□ -0.84
VPS50-211ENST00000474412 TMEM88BA6NKF7 163 aa9.79□□□□□ -0.84
VPS50-211ENST00000474412 CAPN12Q6ZSI9 719 aa9.79□□□□□ -0.84
VPS50-211ENST00000474412 KRT27Q7Z3Y8 459 aa9.79□□□□□ -0.84
VPS50-211ENST00000474412 DEFB132Q7Z7B7 95 aa9.79□□□□□ -0.84
VPS50-211ENST00000474412 NLRP13Q86W25 1043 aa9.79□□□□□ -0.84
VPS50-211ENST00000474412 NME9Q86XW9 330 aa9.79□□□□□ -0.84
VPS50-211ENST00000474412 VIRMAQ69YN4 1812 aaKnown RBP9.79□□□□□ -0.84
VPS50-211ENST00000474412 KAT6BQ8WYB5 2073 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 SIN3BO75182 1162 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 INPP5BP32019 993 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 TREML1Q86YW5 311 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.78□□□□□ -0.84
VPS50-211ENST00000474412 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 DISP2A7MBM2 1401 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 TTC21AQ8NDW8 1320 aa9.78□□□□□ -0.84
VPS50-211ENST00000474412 AATKQ6ZMQ8 1374 aa9.77□□□□□ -0.84
VPS50-211ENST00000474412 USP31Q70CQ4 1352 aa9.77□□□□□ -0.84
VPS50-211ENST00000474412 TOGARAM1Q9Y4F4 1720 aa9.77□□□□□ -0.85
VPS50-211ENST00000474412 PHF20L1A8MW92 1017 aa9.77□□□□□ -0.85
VPS50-211ENST00000474412 BRD2P25440 801 aaKnown RBP9.77□□□□□ -0.85
VPS50-211ENST00000474412 IRS1P35568 1242 aa9.77□□□□□ -0.85
VPS50-211ENST00000474412 BEND7Q8N7W2 519 aaPredicted RBP9.77□□□□□ -0.85
VPS50-211ENST00000474412 TMC1Q8TDI8 760 aa9.77□□□□□ -0.85
VPS50-211ENST00000474412 BTBD6Q96KE9 485 aa9.77□□□□□ -0.85
VPS50-211ENST00000474412 CNTNAP5Q8WYK1 1306 aa9.77□□□□□ -0.85
VPS50-211ENST00000474412 CASZ1Q86V15 1759 aa9.76□□□□□ -0.85
VPS50-211ENST00000474412 ELOA3CA0A087WX78 387 aaPredicted RBP9.76□□□□□ -0.85
VPS50-211ENST00000474412 ELOA3DA6NLF2 546 aaPredicted RBP9.76□□□□□ -0.85
VPS50-211ENST00000474412 ALAS2P22557 587 aa9.76□□□□□ -0.85
VPS50-211ENST00000474412 KCNMA1Q12791 1236 aa9.76□□□□□ -0.85
VPS50-211ENST00000474412 CCINQ13939 588 aa9.76□□□□□ -0.85
VPS50-211ENST00000474412 ELOA3BQ3SY89 546 aa9.76□□□□□ -0.85
VPS50-211ENST00000474412 ELOA3Q8NG57 546 aa9.76□□□□□ -0.85
VPS50-211ENST00000474412 ITGB4P16144 1822 aa9.75□□□□□ -0.85
VPS50-211ENST00000474412 TBC1D8BQ0IIM8 1120 aa9.75□□□□□ -0.85
VPS50-211ENST00000474412 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
VPS50-211ENST00000474412 MKL2Q9ULH7 1088 aa9.75□□□□□ -0.85
VPS50-211ENST00000474412 PKD1L3Q7Z443 1732 aa9.75□□□□□ -0.85
VPS50-211ENST00000474412 ANKRD36BQ8N2N9 1353 aa9.75□□□□□ -0.85
VPS50-211ENST00000474412 TNS2Q63HR2 1409 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 CARNS1A5YM72 827 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 SNRPNP63162 240 aaKnown RBP9.74□□□□□ -0.85
VPS50-211ENST00000474412 ARHGEF25Q86VW2 580 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 RGL4Q8IZJ4 473 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 GSX2Q9BZM3 304 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 IGFLR1Q9H665 355 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 SEPT3Q9UH03 358 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 USP20Q9Y2K6 914 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.74□□□□□ -0.85
VPS50-211ENST00000474412 WDR17Q8IZU2 1322 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 NINLQ9Y2I6 1382 aa9.74□□□□□ -0.85
VPS50-211ENST00000474412 LY75O60449 1722 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 TNFRSF10BO14763 440 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 NFKB1P19838 968 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 ADH7P40394 386 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 EVA1CP58658 441 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 RASSF7Q02833 373 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 KANK3Q6NY19 840 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 KRT25Q7Z3Z0 450 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 ETFBKMTQ8IXQ9 262 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 TNFRSF25Q93038 417 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 UBE2OQ9C0C9 1292 aaKnown RBP9.73□□□□□ -0.85
VPS50-211ENST00000474412 EFCC1Q9HA90 598 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 USTQ9Y2C2 406 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
VPS50-211ENST00000474412 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
VPS50-211ENST00000474412 ADARB2-AS1A8MUL3 147 aa9.72□□□□□ -0.85
VPS50-211ENST00000474412 FBLN1P23142 703 aa9.72□□□□□ -0.85
VPS50-211ENST00000474412 SSFA2P28290 1259 aa9.72□□□□□ -0.85
VPS50-211ENST00000474412 GRNP28799 593 aaKnown RBP9.72□□□□□ -0.85
VPS50-211ENST00000474412 HDGFL2Q7Z4V5 671 aaPredicted RBP9.72□□□□□ -0.85
VPS50-211ENST00000474412 CMTR1Q8N1G2 835 aaKnown RBP9.72□□□□□ -0.85
VPS50-211ENST00000474412 STIM2Q9P246 746 aa9.72□□□□□ -0.85
VPS50-211ENST00000474412 CLSPNQ9HAW4 1339 aa9.72□□□□□ -0.85
VPS50-211ENST00000474412 NSD3Q9BZ95 1437 aa9.72□□□□□ -0.85
VPS50-211ENST00000474412 TAF1LQ8IZX4 1826 aa9.71□□□□□ -0.85
VPS50-211ENST00000474412 OPLAHO14841 1288 aa9.71□□□□□ -0.86
VPS50-211ENST00000474412 SCNN1AP37088 669 aa9.71□□□□□ -0.86
VPS50-211ENST00000474412 TOM1L2Q6ZVM7 507 aa9.71□□□□□ -0.86
VPS50-211ENST00000474412 QSER1Q2KHR3 1735 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms