RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 EAPPQ56P03 285 aaPredicted RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 NGEFQ8N5V2 710 aa8.79□□□□□ -1
GPNMB-209ENST00000474157 ALKBH8Q96BT7 664 aaKnown RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 NIF3L1Q9GZT8 377 aa8.79□□□□□ -1
GPNMB-209ENST00000474157 C19orf44Q9H6X5 657 aa8.79□□□□□ -1
GPNMB-209ENST00000474157 UPF2Q9HAU5 1272 aaKnown RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 CUEDC1Q9NWM3 386 aaPredicted RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 TRPC5Q9UL62 973 aaPredicted RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 KCNMB2Q9Y691 235 aa8.79□□□□□ -1
GPNMB-209ENST00000474157 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
GPNMB-209ENST00000474157 ADGBQ8N7X0 1667 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 DCDC2BA2VCK2 349 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 H7C1W4 665 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 LCE2BO14633 110 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 ATXN7O15265 892 aaPredicted RBP8.78□□□□□ -1
GPNMB-209ENST00000474157 GUCY2CP25092 1073 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 MAPK8P45983 427 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 PLCB3Q01970 1234 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 DBN1Q16643 649 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 ICE2Q659A1 982 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 FIGNL1Q6PIW4 674 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 TSHZ1Q6ZSZ6 1077 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 TACO1Q9BSH4 297 aaKnown RBP8.78□□□□□ -1
GPNMB-209ENST00000474157 USP21Q9UK80 565 aa8.78□□□□□ -1
GPNMB-209ENST00000474157 MBD5Q9P267 1494 aa8.77□□□□□ -1
GPNMB-209ENST00000474157 GOLGA6L6A8MZA4 724 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 GOLGA6L22H0YM25 854 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 PPP1R12AO14974 1030 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-209ENST00000474157 ADAMTS2O95450 1211 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 FAM157BP0CG42 384 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 TAGLNQ01995 201 aaKnown RBP8.77□□□□□ -1.01
GPNMB-209ENST00000474157 UBAP2LQ14157 1087 aaKnown RBP8.77□□□□□ -1.01
GPNMB-209ENST00000474157 SYCP1Q15431 976 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 BRINP3Q76B58 766 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 TRIM22Q8IYM9 498 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 GOLGA6L1Q8N7Z2 621 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 NUDCQ9Y266 331 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 FNDC3AQ9Y2H6 1198 aaKnown RBP8.77□□□□□ -1.01
GPNMB-209ENST00000474157 PCDHGC4Q9Y5F7 938 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 NCOA3Q9Y6Q9 1424 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 ERBB4Q15303 1308 aa8.77□□□□□ -1.01
GPNMB-209ENST00000474157 EHBP1L1Q8N3D4 1523 aa8.76□□□□□ -1.01
GPNMB-209ENST00000474157 LOC102724159A0A0B4J2E5 919 aa8.76□□□□□ -1.01
GPNMB-209ENST00000474157 UNCXA6NJT0 531 aa8.76□□□□□ -1.01
GPNMB-209ENST00000474157 KHNYNO15037 678 aaKnown RBP8.76□□□□□ -1.01
GPNMB-209ENST00000474157 TSPY4P0CV99 314 aa8.76□□□□□ -1.01
GPNMB-209ENST00000474157 TSPY10P0CW01 314 aa8.76□□□□□ -1.01
GPNMB-209ENST00000474157 ITGA6P23229 1130 aa8.76□□□□□ -1.01
GPNMB-209ENST00000474157 PWP2Q15269 919 aaKnown RBP8.76□□□□□ -1.01
GPNMB-209ENST00000474157 CCDC91Q7Z6B0 441 aa8.76□□□□□ -1.01
GPNMB-209ENST00000474157 ZNF837Q96EG3 531 aaPredicted RBP8.76□□□□□ -1.01
GPNMB-209ENST00000474157 EFSO43281 561 aa8.75□□□□□ -1.01
GPNMB-209ENST00000474157 HSPA5P11021 654 aaKnown RBP8.75□□□□□ -1.01
GPNMB-209ENST00000474157 NOP2P46087 812 aaKnown RBP8.75□□□□□ -1.01
GPNMB-209ENST00000474157 TDO2P48775 406 aa8.75□□□□□ -1.01
GPNMB-209ENST00000474157 SFSWAPQ12872 951 aaKnown RBP8.75□□□□□ -1.01
GPNMB-209ENST00000474157 MTA1Q13330 715 aa8.75□□□□□ -1.01
GPNMB-209ENST00000474157 ORC1Q13415 861 aa8.75□□□□□ -1.01
GPNMB-209ENST00000474157 ZNF438Q7Z4V0 828 aa8.75□□□□□ -1.01
GPNMB-209ENST00000474157 DEFB132Q7Z7B7 95 aa8.75□□□□□ -1.01
GPNMB-209ENST00000474157 KCNH4Q9UQ05 1017 aa8.75□□□□□ -1.01
GPNMB-209ENST00000474157 SETD5Q9C0A6 1442 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 AHDC1Q5TGY3 1603 aaPredicted RBP8.74□□□□□ -1.01
GPNMB-209ENST00000474157 PNMA6FA0A0J9YX94 578 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 XYLBO75191 536 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 HSP90AB1P08238 724 aaKnown RBP8.74□□□□□ -1.01
GPNMB-209ENST00000474157 MCM4P33991 863 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 CBX1P83916 185 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 TNP2Q05952 138 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 CCDC96Q2M329 555 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 PDE12Q6L8Q7 609 aaKnown RBP8.74□□□□□ -1.01
GPNMB-209ENST00000474157 ANKRD23Q86SG2 305 aa8.74□□□□□ -1.01
GPNMB-209ENST00000474157 BLMP54132 1417 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-209ENST00000474157 SHPRHQ149N8 1683 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 CCDC196A0A1B0GTZ2 297 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 KLHL33A6NCF5 533 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 CTAGE5O15320 804 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 BNIP3LO60238 219 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 LDHBP07195 334 aaKnown RBP8.73□□□□□ -1.01
GPNMB-209ENST00000474157 MAPTP10636 758 aaKnown RBP8.73□□□□□ -1.01
GPNMB-209ENST00000474157 KCNQ4P56696 695 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 IDI1Q13907 227 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 GTPBP3Q969Y2 492 aaKnown RBP8.73□□□□□ -1.01
GPNMB-209ENST00000474157 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 CWC22Q9HCG8 908 aaKnown RBP8.73□□□□□ -1.01
GPNMB-209ENST00000474157 STRN4Q9NRL3 753 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 FOXD3Q9UJU5 478 aaPredicted RBP8.73□□□□□ -1.01
GPNMB-209ENST00000474157 WWC3Q9ULE0 1092 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 NWD1Q149M9 1564 aa8.73□□□□□ -1.01
GPNMB-209ENST00000474157 PPFIA3O75145 1194 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 TNFRSF21O75509 655 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 ATP2B2Q01814 1243 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 ENOX2Q16206 610 aaKnown RBP8.72□□□□□ -1.01
GPNMB-209ENST00000474157 XKR5Q6UX68 686 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 TMTC2Q8N394 836 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 SNX29Q8TEQ0 813 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 CSRNP1Q96S65 589 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 TSPAN18Q96SJ8 248 aa8.72□□□□□ -1.01
GPNMB-209ENST00000474157 SETDB2Q96T68 719 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms