RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CEACAM5P06731 702 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 FAM87AP0C7U9 286 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 MZF1P28698 734 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-203ENST00000473854 AFMP43652 599 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 DNM1Q05193 864 aaKnown RBP4.94□□□□□ -1.62
CCDC39-203ENST00000473854 EHHADHQ08426 723 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 CFAP70Q5T0N1 1121 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 SYDE1Q6ZW31 735 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-203ENST00000473854 AMIGO3Q86WK7 504 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 PIDD1Q9HB75 910 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.94□□□□□ -1.62
CCDC39-203ENST00000473854 SNX11Q9Y5W9 270 aa4.94□□□□□ -1.62
CCDC39-203ENST00000473854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.94□□□□□ -1.62
CCDC39-203ENST00000473854 ZNF503-AS2A6NEH8 195 aa4.93□□□□□ -1.62
CCDC39-203ENST00000473854 DYNC1LI2O43237 492 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-203ENST00000473854 PDGFAP04085 211 aa4.93□□□□□ -1.62
CCDC39-203ENST00000473854 FAM181AQ8N9Y4 354 aa4.93□□□□□ -1.62
CCDC39-203ENST00000473854 ASB11Q8WXH4 323 aa4.93□□□□□ -1.62
CCDC39-203ENST00000473854 ATXN3LQ9H3M9 355 aa4.93□□□□□ -1.62
CCDC39-203ENST00000473854 EREGO14944 169 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 USP5P45974 858 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 CTSWP56202 376 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 FAM69CQ0P6D2 419 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 NOM1Q5C9Z4 860 aaKnown RBP4.92□□□□□ -1.62
CCDC39-203ENST00000473854 ALKBH2Q6NS38 261 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 MPZL3Q6UWV2 235 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 ATCAYQ86WG3 371 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 CRIM1Q9NZV1 1036 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 AMOTL2Q9Y2J4 779 aa4.92□□□□□ -1.62
CCDC39-203ENST00000473854 A0A096LPE4 126 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 A0A1W2PPZ6 126 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 AOC2O75106 756 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 TNFRSF21O75509 655 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 GLI1P08151 1106 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 AP3B2Q13367 1082 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 PDE3AQ14432 1141 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 CAPN12Q6ZSI9 719 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 FBXO15Q8NCQ5 510 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-203ENST00000473854 CLUAP1Q96AJ1 413 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 GGNBP2Q9H3C7 697 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 ZMIZ1Q9ULJ6 1067 aa4.91□□□□□ -1.62
CCDC39-203ENST00000473854 SLFN14P0C7P3 912 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 CDK5R2Q13319 367 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 ECM1Q16610 540 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 CDCA8Q53HL2 280 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 CIAPIN1Q6FI81 312 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 HELQQ8TDG4 1101 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 CLP1Q92989 425 aaKnown RBP4.9□□□□□ -1.63
CCDC39-203ENST00000473854 LIN37Q96GY3 246 aaPredicted RBP4.9□□□□□ -1.63
CCDC39-203ENST00000473854 WDR18Q9BV38 432 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 LGR6Q9HBX8 967 aa4.9□□□□□ -1.63
CCDC39-203ENST00000473854 CTSBP07858 339 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 INHBBP09529 407 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 TMEM253P0C7T8 217 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 CD96P40200 585 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 OXCT1P55809 520 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 ZP2Q05996 745 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 IKZF1Q13422 519 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 ZNF423Q2M1K9 1284 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 SMYD4Q8IYR2 804 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-203ENST00000473854 KIRREL1Q96J84 757 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 TNKS2Q9H2K2 1166 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 CTNND2Q9UQB3 1225 aa4.89□□□□□ -1.63
CCDC39-203ENST00000473854 B3GALT4O96024 378 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 C1QTNF9P0C862 333 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 TMEM67Q5HYA8 995 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 PEAR1Q5VY43 1037 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-203ENST00000473854 DBX2Q6ZNG2 339 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 CCNJLQ8IV13 435 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 STK32AQ8WU08 396 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 CCDC120Q96HB5 630 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 CSRNP1Q96S65 589 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 TRIM56Q9BRZ2 755 aaKnown RBP4.88□□□□□ -1.63
CCDC39-203ENST00000473854 GTF2IRD1Q9UHL9 959 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 ZNF777Q9ULD5 760 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-203ENST00000473854 JAG2Q9Y219 1238 aa4.88□□□□□ -1.63
CCDC39-203ENST00000473854 A6NHS1 94 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 METTL12A8MUP2 240 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-203ENST00000473854 TMPRSS2O15393 492 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 ID3Q02535 119 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 TPRNQ4KMQ1 711 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 PRR23BQ6ZRT6 265 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 CYFIP1Q7L576 1253 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 DUSP23Q9BVJ7 150 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 PCOLCE2Q9UKZ9 415 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 PPP1R9AQ9ULJ8 1098 aa4.87□□□□□ -1.63
CCDC39-203ENST00000473854 TCAF2A6NFQ2 919 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 NPIPB6E9PJ23 425 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 ITIH2P19823 946 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 EIF1AXP47813 144 aaKnown RBP4.86□□□□□ -1.63
CCDC39-203ENST00000473854 KCNA10Q16322 511 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 FANCD2OSQ96PS1 177 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 LIN7BQ9HAP6 207 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 LATS2Q9NRM7 1088 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 PLAGL2Q9UPG8 496 aa4.86□□□□□ -1.63
CCDC39-203ENST00000473854 IGF2BP3O00425 579 aaKnown RBP eCLIP4.85□□□□□ -1.63
CCDC39-203ENST00000473854 MED14OSP0DP75 135 aa4.85□□□□□ -1.63
CCDC39-203ENST00000473854 CLCN7P51798 805 aa4.85□□□□□ -1.63
CCDC39-203ENST00000473854 RELTQ969Z4 430 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms