RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 HSPA2P54652 639 aa12.71□□□□□ -0.37
C9orf3-214ENST00000473778 SF3A1Q15459 793 aaKnown RBP12.71□□□□□ -0.37
C9orf3-214ENST00000473778 CEP135Q66GS9 1140 aa12.71□□□□□ -0.37
C9orf3-214ENST00000473778 RALYLQ86SE5 291 aaKnown RBP12.71□□□□□ -0.37
C9orf3-214ENST00000473778 NLRP10Q86W26 655 aa12.71□□□□□ -0.37
C9orf3-214ENST00000473778 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
C9orf3-214ENST00000473778 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
C9orf3-214ENST00000473778 SLIT2O94813 1529 aa12.71□□□□□ -0.37
C9orf3-214ENST00000473778 RANBP6O60518 1105 aaKnown RBP12.71□□□□□ -0.38
C9orf3-214ENST00000473778 ARMCX5Q6P1M9 558 aa12.71□□□□□ -0.38
C9orf3-214ENST00000473778 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.38
C9orf3-214ENST00000473778 GTPBP4Q9BZE4 634 aaKnown RBP12.71□□□□□ -0.38
C9orf3-214ENST00000473778 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.38
C9orf3-214ENST00000473778 MAP3K15Q6ZN16 1313 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 TCRBV5S4A2TA0A5A2 114 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 ABCB7O75027 752 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 IDH1O75874 414 aaKnown RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 KIF20AO95235 890 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 ATP1A3P13637 1013 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 NTRK3Q16288 839 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 APOA5Q6Q788 366 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 VPS37DQ86XT2 251 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 CCAR2Q8N163 923 aaKnown RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 IFNKQ9P0W0 207 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 ATRNO75882 1429 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 NUP98P52948 1817 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 ABCC12Q96J65 1359 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 ZMYM6O95789 1325 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 SOS2Q07890 1332 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 ZNF532Q9HCE3 1301 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 SH2B2O14492 632 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 DHX16O60231 1041 aaKnown RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 CTSWP56202 376 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 PTPAQ15257 358 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 E4F1Q66K89 784 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 SHC4Q6S5L8 630 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
C9orf3-214ENST00000473778 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-214ENST00000473778 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 CMA1P23946 247 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 SLC39A14Q15043 492 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 PTPN21Q16825 1174 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 CCDC102BQ68D86 513 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 KRT40Q6A162 431 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 KIF6Q6ZMV9 814 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 CCDC112Q8NEF3 446 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 CLIC6Q96NY7 704 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 MAP3K14Q99558 947 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 EPB41L4AQ9HCS5 686 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 PAXBP1Q9Y5B6 917 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 CHD4Q14839 1912 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 PDE6AP16499 860 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 SYNE3Q6ZMZ3 975 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 BPIFA3Q9BQP9 254 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 ALG1Q9BT22 464 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 NAT10Q9H0A0 1025 aaKnown RBP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 ZNF215Q9UL58 517 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-214ENST00000473778 HPSEQ9Y251 543 aa12.69□□□□□ -0.38
C9orf3-214ENST00000473778 LRP6O75581 1613 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 UBN2Q6ZU65 1347 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 NEMFO60524 1076 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 PDE8BO95263 885 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 APPP05067 770 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 LMOD1P29536 600 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-214ENST00000473778 NLRP12P59046 1061 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 CNNM1Q9NRU3 951 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
C9orf3-214ENST00000473778 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-214ENST00000473778 SMC2O95347 1197 aa12.67□□□□□ -0.38
C9orf3-214ENST00000473778 PNOCQ13519 176 aa12.67□□□□□ -0.38
C9orf3-214ENST00000473778 TMC6Q7Z403 805 aa12.67□□□□□ -0.38
C9orf3-214ENST00000473778 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-214ENST00000473778 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
C9orf3-214ENST00000473778 DPF2Q92785 391 aa12.67□□□□□ -0.38
C9orf3-214ENST00000473778 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
C9orf3-214ENST00000473778 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
C9orf3-214ENST00000473778 LY9Q9HBG7 655 aa12.67□□□□□ -0.38
C9orf3-214ENST00000473778 GUCY1A2P33402 732 aa12.67□□□□□ -0.38
C9orf3-214ENST00000473778 ZNF512BQ96KM6 892 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-214ENST00000473778 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 FOXN1O15353 648 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-214ENST00000473778 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 UBE3CQ15386 1083 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 SYCP1Q15431 976 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
C9orf3-214ENST00000473778 LRRN4CLQ8ND94 238 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms