RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 ZFYVE1Q9HBF4 777 aa6.96□□□□□ -1.3
GINS1-202ENST00000473460 LGR6Q9HBX8 967 aa6.96□□□□□ -1.3
GINS1-202ENST00000473460 DAGLAQ9Y4D2 1042 aa6.96□□□□□ -1.3
GINS1-202ENST00000473460 SYNGAP1Q96PV0 1343 aa6.96□□□□□ -1.3
GINS1-202ENST00000473460 TMPRSS2O15393 492 aa6.95□□□□□ -1.3
GINS1-202ENST00000473460 CPNE3O75131 537 aaKnown RBP6.95□□□□□ -1.3
GINS1-202ENST00000473460 FAAP100Q0VG06 881 aa6.95□□□□□ -1.3
GINS1-202ENST00000473460 PDE3AQ14432 1141 aa6.95□□□□□ -1.3
GINS1-202ENST00000473460 PRPF40BQ6NWY9 871 aaKnown RBP6.95□□□□□ -1.3
GINS1-202ENST00000473460 OGFOD3Q6PK18 319 aa6.95□□□□□ -1.3
GINS1-202ENST00000473460 GLYCTKQ8IVS8 523 aa6.95□□□□□ -1.3
GINS1-202ENST00000473460 AGBL5Q8NDL9 886 aa6.95□□□□□ -1.3
GINS1-202ENST00000473460 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
GINS1-202ENST00000473460 BCL7CQ8WUZ0 217 aaPredicted RBP6.95□□□□□ -1.3
GINS1-202ENST00000473460 GPR182O15218 404 aa6.94□□□□□ -1.3
GINS1-202ENST00000473460 LIG1P18858 919 aa6.94□□□□□ -1.3
GINS1-202ENST00000473460 SPRED2Q7Z698 418 aa6.94□□□□□ -1.3
GINS1-202ENST00000473460 DDX54Q8TDD1 881 aaKnown RBP6.94□□□□□ -1.3
GINS1-202ENST00000473460 ASIC4Q96FT7 647 aa6.94□□□□□ -1.3
GINS1-202ENST00000473460 CCDC86Q9H6F5 360 aaKnown RBP6.94□□□□□ -1.3
GINS1-202ENST00000473460 ZNF862O60290 1169 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 PAPLNO95428 1278 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 NEFLP07196 543 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 JUNBP17275 347 aaPredicted RBP6.93□□□□□ -1.3
GINS1-202ENST00000473460 JAG1P78504 1218 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 AP3B2Q13367 1082 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 POU5F2Q8N7G0 328 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 CRIM1Q9NZV1 1036 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 USTQ9Y2C2 406 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 PCDHGC5Q9Y5F6 944 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 U3KQE9 123 aa6.93□□□□□ -1.3
GINS1-202ENST00000473460 TMEM238LA0A1B0GVL6 79 aa6.92□□□□□ -1.3
GINS1-202ENST00000473460 EIF1AYO14602 144 aaKnown RBP6.92□□□□□ -1.3
GINS1-202ENST00000473460 NDUFB5O43674 189 aa6.92□□□□□ -1.3
GINS1-202ENST00000473460 ZNF157P51786 506 aaPredicted RBP6.92□□□□□ -1.3
GINS1-202ENST00000473460 RPS26P11Q5JNZ5 115 aaPredicted RBP6.92□□□□□ -1.3
GINS1-202ENST00000473460 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
GINS1-202ENST00000473460 FANCD2OSQ96PS1 177 aa6.92□□□□□ -1.3
GINS1-202ENST00000473460 ZC3H12CQ9C0D7 883 aaKnown RBP6.92□□□□□ -1.3
GINS1-202ENST00000473460 SLC5A6Q9Y289 635 aa6.92□□□□□ -1.3
GINS1-202ENST00000473460 ARID1BQ8NFD5 2236 aaPredicted RBP6.92□□□□□ -1.3
GINS1-202ENST00000473460 C8AP07357 584 aa6.91□□□□□ -1.3
GINS1-202ENST00000473460 BNIP3Q12983 259 aa6.91□□□□□ -1.3
GINS1-202ENST00000473460 CDK5R2Q13319 367 aa6.91□□□□□ -1.3
GINS1-202ENST00000473460 PDE3BQ13370 1112 aa6.91□□□□□ -1.3
GINS1-202ENST00000473460 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
GINS1-202ENST00000473460 GTF3C3Q9Y5Q9 886 aa6.91□□□□□ -1.3
GINS1-202ENST00000473460 FAM87AP0C7U9 286 aa6.9□□□□□ -1.3
GINS1-202ENST00000473460 GRM2Q14416 872 aa6.9□□□□□ -1.3
GINS1-202ENST00000473460 KIF4BQ2VIQ3 1234 aa6.9□□□□□ -1.3
GINS1-202ENST00000473460 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.3
GINS1-202ENST00000473460 PLD6Q8N2A8 252 aaKnown RBP6.9□□□□□ -1.3
GINS1-202ENST00000473460 CITED4Q96RK1 184 aa6.9□□□□□ -1.3
GINS1-202ENST00000473460 NIF3L1Q9GZT8 377 aa6.9□□□□□ -1.3
GINS1-202ENST00000473460 DISC1Q9NRI5 854 aa6.9□□□□□ -1.3
GINS1-202ENST00000473460 ID3Q02535 119 aa6.89□□□□□ -1.31
GINS1-202ENST00000473460 CYP27C1Q4G0S4 372 aa6.89□□□□□ -1.31
GINS1-202ENST00000473460 TXNDC2Q86VQ3 553 aa6.89□□□□□ -1.31
GINS1-202ENST00000473460 STK11IPQ8N1F8 1099 aa6.89□□□□□ -1.31
GINS1-202ENST00000473460 FAM181AQ8N9Y4 354 aa6.89□□□□□ -1.31
GINS1-202ENST00000473460 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
GINS1-202ENST00000473460 CARMIL2Q6F5E8 1435 aa6.89□□□□□ -1.31
GINS1-202ENST00000473460 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
GINS1-202ENST00000473460 GSTP1P09211 210 aaKnown RBP6.88□□□□□ -1.31
GINS1-202ENST00000473460 PLCL1Q15111 1095 aa6.88□□□□□ -1.31
GINS1-202ENST00000473460 B4GALNT3Q6L9W6 998 aa6.88□□□□□ -1.31
GINS1-202ENST00000473460 PDZD3Q86UT5 571 aa6.88□□□□□ -1.31
GINS1-202ENST00000473460 NETO1Q8TDF5 533 aa6.88□□□□□ -1.31
GINS1-202ENST00000473460 EPS8L3Q8TE67 593 aaKnown RBP6.88□□□□□ -1.31
GINS1-202ENST00000473460 ATXN3LQ9H3M9 355 aa6.88□□□□□ -1.31
GINS1-202ENST00000473460 KRT82Q9NSB4 513 aa6.88□□□□□ -1.31
GINS1-202ENST00000473460 LEFTY1O75610 366 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 CD8BP10966 210 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 TTLL4Q14679 1199 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 SMYD4Q8IYR2 804 aaPredicted RBP6.87□□□□□ -1.31
GINS1-202ENST00000473460 STK35Q8TDR2 534 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 ALKBH8Q96BT7 664 aaKnown RBP6.87□□□□□ -1.31
GINS1-202ENST00000473460 MISP3Q96FF7 219 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 TRAK1Q9UPV9 953 aa6.87□□□□□ -1.31
GINS1-202ENST00000473460 NEFMP07197 916 aa6.86□□□□□ -1.31
GINS1-202ENST00000473460 SLFN14P0C7P3 912 aa6.86□□□□□ -1.31
GINS1-202ENST00000473460 FUT4P22083 530 aa6.86□□□□□ -1.31
GINS1-202ENST00000473460 CD96P40200 585 aa6.86□□□□□ -1.31
GINS1-202ENST00000473460 PI16Q6UXB8 463 aa6.86□□□□□ -1.31
GINS1-202ENST00000473460 ADAMTS6Q9UKP5 1117 aa6.86□□□□□ -1.31
GINS1-202ENST00000473460 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
GINS1-202ENST00000473460 HCLS1P14317 486 aaPredicted RBP6.85□□□□□ -1.31
GINS1-202ENST00000473460 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
GINS1-202ENST00000473460 OXCT1P55809 520 aa6.84□□□□□ -1.31
GINS1-202ENST00000473460 FCGRTP55899 365 aa6.84□□□□□ -1.31
GINS1-202ENST00000473460 TMC1Q8TDI8 760 aa6.84□□□□□ -1.31
GINS1-202ENST00000473460 RBCK1Q9BYM8 510 aa6.84□□□□□ -1.31
GINS1-202ENST00000473460 MBNL3Q9NUK0 354 aaKnown RBP6.84□□□□□ -1.31
GINS1-202ENST00000473460 TMEM39AQ9NV64 488 aa6.84□□□□□ -1.31
GINS1-202ENST00000473460 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
GINS1-202ENST00000473460 VAV3Q9UKW4 847 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms