RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 KRT40Q6A162 431 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 FCHSD1Q86WN1 690 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 XAGE2Q96GT9 111 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 TULP1O00294 542 aaPredicted RBP16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 CLIC6Q96NY7 704 aa16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 PARP3Q9Y6F1 533 aa16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 ARHGAP6O43182 974 aa16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 PDILTQ8N807 584 aa16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 CNNM3Q8NE01 707 aa16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 PPP2R2CQ9Y2T4 447 aa16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
NHLRC3-204ENST00000473371 FANCGO15287 622 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 GPAA1O43292 621 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CDKL5O76039 1030 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 SEC31AO94979 1220 aaKnown RBP16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 RXRAP19793 462 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CYP2C19P33261 490 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 POLR3GO15318 223 aaPredicted RBP16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 ZAP70P43403 619 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 PTPAQ15257 358 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 TEX35Q5T0J7 233 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 RESP18Q5W5W9 173 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CCDC102BQ68D86 513 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 ATG3Q9NT62 314 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 AKAP2Q9Y2D5 859 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CPDO75976 1380 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 MYO1BO43795 1136 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CASQ1P31415 396 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 SCARF1Q14162 830 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 HSP90AA4PQ58FG1 418 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 METTL16Q86W50 562 aaKnown RBP16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 ANGEL1Q9UNK9 670 aaKnown RBP16.38■□□□□ 0.21
NHLRC3-204ENST00000473371 WDR19Q8NEZ3 1342 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 TMEM94Q12767 1356 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 GNG11P61952 73 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 LONRF3Q496Y0 759 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 PHKBQ93100 1093 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 PCDHA5Q9Y5H7 936 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 KIF1AQ12756 1690 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 TRIM29Q14134 588 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 KRBA2Q6ZNG9 492 aa16.37■□□□□ 0.21
NHLRC3-204ENST00000473371 CUTAO60888 179 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 BAG1Q99933 345 aaPredicted RBP16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 EPC1Q9H2F5 836 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 KCNH3Q9ULD8 1083 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 TMEM139Q8IV31 216 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 DENND2AQ9ULE3 1009 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 FAM237AA0A1B0GTK4 181 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 GOLGA6L9A6NEM1 432 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 A1BGP04217 495 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 CDK11BP21127 795 aaKnown RBP16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 PI16Q6UXB8 463 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 MICU3Q86XE3 530 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 RGS22Q8NE09 1264 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.36■□□□□ 0.21
NHLRC3-204ENST00000473371 C4AP0C0L4 1744 aa16.35■□□□□ 0.21
NHLRC3-204ENST00000473371 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
NHLRC3-204ENST00000473371 PDE4BQ07343 736 aa16.35■□□□□ 0.21
NHLRC3-204ENST00000473371 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
NHLRC3-204ENST00000473371 INTS13Q9NVM9 706 aa16.35■□□□□ 0.21
NHLRC3-204ENST00000473371 ZBTB22O15209 634 aa16.35■□□□□ 0.21
NHLRC3-204ENST00000473371 CYB5R4Q7L1T6 521 aa16.35■□□□□ 0.21
NHLRC3-204ENST00000473371 ATP8B1O43520 1251 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 APPP05067 770 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 CDC27P30260 824 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 NFXL1Q6ZNB6 911 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 WDR24Q96S15 920 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 TRPM3Q9HCF6 1732 aaPredicted RBP16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 SH2B2O14492 632 aaPredicted RBP16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 PPP2R3AQ06190 1150 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 FOXN1O15353 648 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 MAP3K9P80192 1104 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 TBC1D10CQ8IV04 446 aa16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 GPR161Q8N6U8 529 aaKnown RBP16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
NHLRC3-204ENST00000473371 ZBTB43O43298 467 aa16.33■□□□□ 0.21
NHLRC3-204ENST00000473371 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.21
NHLRC3-204ENST00000473371 TJP1Q07157 1748 aa16.33■□□□□ 0.21
NHLRC3-204ENST00000473371 TBX2Q13207 712 aaPredicted RBP16.33■□□□□ 0.21
NHLRC3-204ENST00000473371 SPECC1Q5M775 1068 aa16.33■□□□□ 0.21
NHLRC3-204ENST00000473371 NBPF3Q9H094 633 aa16.33■□□□□ 0.21
NHLRC3-204ENST00000473371 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.33■□□□□ 0.21
NHLRC3-204ENST00000473371 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.2
NHLRC3-204ENST00000473371 STX10O60499 249 aa16.33■□□□□ 0.2
NHLRC3-204ENST00000473371 BMP6P22004 513 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms