RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 TBC1D22AQ8WUA7 517 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 ZDHHC15Q96MV8 337 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 MEIS3Q99687 375 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 SNCAIPQ9Y6H5 919 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
BRD3-205ENST00000473349 LAMB1P07942 1786 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 SLC5A1P13866 664 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 PHKA1P46020 1223 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 TCP10Q12799 353 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 NFIAQ12857 509 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 CCL15Q16663 113 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 LPIN2Q92539 896 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 WRNIP1Q96S55 665 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 DAGLAQ9Y4D2 1042 aa11.83□□□□□ -0.52
BRD3-205ENST00000473349 ZSWIM8A7E2V4 1837 aa11.82□□□□□ -0.52
BRD3-205ENST00000473349 TESPA1A2RU30 521 aaPredicted RBP11.82□□□□□ -0.52
BRD3-205ENST00000473349 INPP5BP32019 993 aa11.82□□□□□ -0.52
BRD3-205ENST00000473349 TNNI2P48788 182 aa11.82□□□□□ -0.52
BRD3-205ENST00000473349 HDLBPQ00341 1268 aaKnown RBP11.82□□□□□ -0.52
BRD3-205ENST00000473349 ATP2B3Q16720 1220 aa11.82□□□□□ -0.52
BRD3-205ENST00000473349 ZFPM1Q8IX07 1006 aa11.82□□□□□ -0.52
BRD3-205ENST00000473349 CSADQ9Y600 493 aa11.82□□□□□ -0.52
BRD3-205ENST00000473349 SLC34A2O95436 690 aa11.81□□□□□ -0.52
BRD3-205ENST00000473349 MYCP01106 439 aaPredicted RBP11.81□□□□□ -0.52
BRD3-205ENST00000473349 RARSP54136 660 aaKnown RBP11.81□□□□□ -0.52
BRD3-205ENST00000473349 TAF1CQ15572 869 aaPredicted RBP11.81□□□□□ -0.52
BRD3-205ENST00000473349 CDC42EP5Q6NZY7 148 aa11.81□□□□□ -0.52
BRD3-205ENST00000473349 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
BRD3-205ENST00000473349 ARHGAP39Q9C0H5 1083 aa11.81□□□□□ -0.52
BRD3-205ENST00000473349 TMOD2Q9NZR1 351 aa11.81□□□□□ -0.52
BRD3-205ENST00000473349 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
BRD3-205ENST00000473349 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
BRD3-205ENST00000473349 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
BRD3-205ENST00000473349 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 SPDYE5A6NIY4 337 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 IRF6O14896 467 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 TIMM10P62072 90 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 SP3Q02447 781 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 OTUD7BQ6GQQ9 843 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 HHIPL2Q6UWX4 724 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 ERO1AQ96HE7 468 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 EFCC1Q9HA90 598 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 FAM198AQ9UFP1 575 aa11.8□□□□□ -0.52
BRD3-205ENST00000473349 BTBD19C9JJ37 291 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 CIAO1O76071 339 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 CLCN6P51797 869 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 GTF2A2P52657 109 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
BRD3-205ENST00000473349 WDR66Q8TBY9 1149 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 MRIQ9BWK5 157 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 API5Q9BZZ5 524 aaKnown RBP11.79□□□□□ -0.52
BRD3-205ENST00000473349 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 MAST3O60307 1309 aa11.79□□□□□ -0.52
BRD3-205ENST00000473349 BCAR3O75815 825 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
BRD3-205ENST00000473349 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
BRD3-205ENST00000473349 TFCP2Q12800 502 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 RASGRF1Q13972 1273 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 CCDC102BQ68D86 513 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 CLUAP1Q96AJ1 413 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 ZFYVE28Q9HCC9 887 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
BRD3-205ENST00000473349 SUGT1Q9Y2Z0 365 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
BRD3-205ENST00000473349 SRGAP3O43295 1099 aa11.77□□□□□ -0.53
BRD3-205ENST00000473349 CTGFP29279 349 aa11.77□□□□□ -0.53
BRD3-205ENST00000473349 IL15P40933 162 aaPredicted RBP11.77□□□□□ -0.53
BRD3-205ENST00000473349 FKBP1CQ5VVH2 108 aa11.77□□□□□ -0.53
BRD3-205ENST00000473349 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
BRD3-205ENST00000473349 ZNF341Q9BYN7 854 aa11.77□□□□□ -0.53
BRD3-205ENST00000473349 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
BRD3-205ENST00000473349 HDAC5Q9UQL6 1122 aa11.77□□□□□ -0.53
BRD3-205ENST00000473349 CETPP11597 493 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 TRIM27P14373 513 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 RGS3P49796 1198 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 PPIL2Q13356 520 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 SNAPC2Q13487 334 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 MOGSQ13724 837 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 PRPF38BQ5VTL8 546 aaKnown RBP11.76□□□□□ -0.53
BRD3-205ENST00000473349 DCAF15Q66K64 600 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
BRD3-205ENST00000473349 CCDC84Q86UT8 332 aaPredicted RBP11.76□□□□□ -0.53
BRD3-205ENST00000473349 SH3TC2Q8TF17 1288 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 ZNF384Q8TF68 577 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
BRD3-205ENST00000473349 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 DDX4Q9NQI0 724 aaKnown RBP11.76□□□□□ -0.53
BRD3-205ENST00000473349 GNL3LQ9NVN8 582 aaKnown RBP11.76□□□□□ -0.53
BRD3-205ENST00000473349 ABCF2Q9UG63 623 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 DENND2AQ9ULE3 1009 aa11.76□□□□□ -0.53
BRD3-205ENST00000473349 RPAP1Q9BWH6 1393 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms