RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CCDC158Q5M9N0 1113 aa16.07■□□□□ 0.16
TPM3-216ENST00000473036 SULF1Q8IWU6 871 aa16.07■□□□□ 0.16
TPM3-216ENST00000473036 OTUD7AQ8TE49 926 aaPredicted RBP16.07■□□□□ 0.16
TPM3-216ENST00000473036 ZDHHC15Q96MV8 337 aa16.07■□□□□ 0.16
TPM3-216ENST00000473036 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
TPM3-216ENST00000473036 TDRD3Q9H7E2 651 aaKnown RBP16.07■□□□□ 0.16
TPM3-216ENST00000473036 PIH1D3Q9NQM4 214 aaKnown RBP16.07■□□□□ 0.16
TPM3-216ENST00000473036 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
TPM3-216ENST00000473036 DAGLAQ9Y4D2 1042 aa16.07■□□□□ 0.16
TPM3-216ENST00000473036 DOCK2Q92608 1830 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
TPM3-216ENST00000473036 SLC10A3P09131 477 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 RBM5P52756 815 aaKnown RBP eCLIP16.06■□□□□ 0.16
TPM3-216ENST00000473036 KIF23Q02241 960 aaPredicted RBP16.06■□□□□ 0.16
TPM3-216ENST00000473036 MECOMQ03112 1051 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 PKN2Q16513 984 aaKnown RBP16.06■□□□□ 0.16
TPM3-216ENST00000473036 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 HHIPL2Q6UWX4 724 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 CDAN1Q8IWY9 1227 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 NSUN4Q96CB9 384 aaKnown RBP16.06■□□□□ 0.16
TPM3-216ENST00000473036 CDCA5Q96FF9 252 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 RNF186Q9NXI6 227 aa16.06■□□□□ 0.16
TPM3-216ENST00000473036 ZNF70Q9UC06 446 aaPredicted RBP16.06■□□□□ 0.16
TPM3-216ENST00000473036 GAKO14976 1311 aa16.05■□□□□ 0.16
TPM3-216ENST00000473036 CACNB3P54284 484 aa16.05■□□□□ 0.16
TPM3-216ENST00000473036 AAMPQ13685 434 aa16.05■□□□□ 0.16
TPM3-216ENST00000473036 TSHZ3Q63HK5 1081 aa16.05■□□□□ 0.16
TPM3-216ENST00000473036 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
TPM3-216ENST00000473036 EDC3Q96F86 508 aaKnown RBP16.05■□□□□ 0.16
TPM3-216ENST00000473036 ZIC5Q96T25 663 aa16.05■□□□□ 0.16
TPM3-216ENST00000473036 SSC5DA1L4H1 1573 aa16.04■□□□□ 0.16
TPM3-216ENST00000473036 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
TPM3-216ENST00000473036 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 SALL3Q9BXA9 1300 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 TRPA1O75762 1119 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
TPM3-216ENST00000473036 PRPF38BQ5VTL8 546 aaKnown RBP16.03■□□□□ 0.16
TPM3-216ENST00000473036 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 CDC42EP5Q6NZY7 148 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 ERICH6Q7L0X2 663 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
TPM3-216ENST00000473036 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
TPM3-216ENST00000473036 DEFB129Q9H1M3 183 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 VEZTQ9HBM0 779 aa16.03■□□□□ 0.16
TPM3-216ENST00000473036 MAST3O60307 1309 aa16.02■□□□□ 0.16
TPM3-216ENST00000473036 NFIAQ12857 509 aa16.02■□□□□ 0.16
TPM3-216ENST00000473036 MOB2Q70IA6 237 aa16.02■□□□□ 0.16
TPM3-216ENST00000473036 APOBEC3FQ8IUX4 373 aaKnown RBP16.02■□□□□ 0.16
TPM3-216ENST00000473036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.02■□□□□ 0.16
TPM3-216ENST00000473036 TEPSINQ96N21 525 aa16.02■□□□□ 0.16
TPM3-216ENST00000473036 CSRNP1Q96S65 589 aa16.02■□□□□ 0.16
TPM3-216ENST00000473036 BOLA2Q9H3K6 86 aa16.02■□□□□ 0.16
TPM3-216ENST00000473036 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
TPM3-216ENST00000473036 MROH7-TTC4A0A0A0MT08 1334 aa16.01■□□□□ 0.15
TPM3-216ENST00000473036 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
TPM3-216ENST00000473036 CHGBP05060 677 aa16.01■□□□□ 0.15
TPM3-216ENST00000473036 ATP5JP18859 108 aa16.01■□□□□ 0.15
TPM3-216ENST00000473036 RASA3Q14644 834 aa16.01■□□□□ 0.15
TPM3-216ENST00000473036 SPTY2D1Q68D10 685 aaPredicted RBP16.01■□□□□ 0.15
TPM3-216ENST00000473036 DZIP1Q86YF9 867 aaKnown RBP16.01■□□□□ 0.15
TPM3-216ENST00000473036 RAI14Q9P0K7 980 aa16.01■□□□□ 0.15
TPM3-216ENST00000473036 CDK5RAP2Q96SN8 1893 aa16.01■□□□□ 0.15
TPM3-216ENST00000473036 RFX7Q2KHR2 1363 aa16■□□□□ 0.15
TPM3-216ENST00000473036 GPR75-ASB3A0A0A6YYF3 556 aa16■□□□□ 0.15
TPM3-216ENST00000473036 RHBDL3P58872 404 aa16■□□□□ 0.15
TPM3-216ENST00000473036 SLFNL1Q499Z3 407 aa16■□□□□ 0.15
TPM3-216ENST00000473036 NBPF12Q5TAG4 269 aaPredicted RBP16■□□□□ 0.15
TPM3-216ENST00000473036 ANKRD45Q5TZF3 282 aa16■□□□□ 0.15
TPM3-216ENST00000473036 ZFPM1Q8IX07 1006 aa16■□□□□ 0.15
TPM3-216ENST00000473036 GCC1Q96CN9 775 aa16■□□□□ 0.15
TPM3-216ENST00000473036 TMEM39BQ9GZU3 492 aa16■□□□□ 0.15
TPM3-216ENST00000473036 LRP2BPQ9P2M1 347 aa16■□□□□ 0.15
TPM3-216ENST00000473036 FAM198AQ9UFP1 575 aa16■□□□□ 0.15
TPM3-216ENST00000473036 PAPPA2Q9BXP8 1791 aa16■□□□□ 0.15
TPM3-216ENST00000473036 GOLIM4O00461 696 aa15.99■□□□□ 0.15
TPM3-216ENST00000473036 MYO1BO43795 1136 aa15.99■□□□□ 0.15
TPM3-216ENST00000473036 BTDP43251 543 aa15.99■□□□□ 0.15
TPM3-216ENST00000473036 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
TPM3-216ENST00000473036 RASAL3Q86YV0 1011 aa15.99■□□□□ 0.15
TPM3-216ENST00000473036 PI4K2BQ8TCG2 481 aa15.99■□□□□ 0.15
TPM3-216ENST00000473036 DNAJC2Q99543 621 aaKnown RBP15.99■□□□□ 0.15
TPM3-216ENST00000473036 HAUS7Q99871 368 aa15.99■□□□□ 0.15
TPM3-216ENST00000473036 RWDD1Q9H446 243 aaPredicted RBP15.99■□□□□ 0.15
TPM3-216ENST00000473036 WDHD1O75717 1129 aaPredicted RBP15.98■□□□□ 0.15
TPM3-216ENST00000473036 DDX4Q9NQI0 724 aaKnown RBP15.98■□□□□ 0.15
TPM3-216ENST00000473036 ECHDC1Q9NTX5 307 aa15.98■□□□□ 0.15
TPM3-216ENST00000473036 USP40Q9NVE5 1235 aa15.98■□□□□ 0.15
TPM3-216ENST00000473036 TCRBV5S4A2TA0A5A2 114 aa15.97■□□□□ 0.15
TPM3-216ENST00000473036 IDH1O75874 414 aaKnown RBP15.97■□□□□ 0.15
TPM3-216ENST00000473036 SOX10P56693 466 aa15.97■□□□□ 0.15
TPM3-216ENST00000473036 FKBP1CQ5VVH2 108 aa15.97■□□□□ 0.15
TPM3-216ENST00000473036 NAA16Q6N069 864 aaPredicted RBP15.97■□□□□ 0.15
TPM3-216ENST00000473036 LNPKQ9C0E8 428 aa15.97■□□□□ 0.15
TPM3-216ENST00000473036 MYH7P12883 1935 aa15.97■□□□□ 0.15
TPM3-216ENST00000473036 SLURP2P0DP57 97 aa15.96■□□□□ 0.15
TPM3-216ENST00000473036 DYNLL1P63167 89 aaKnown RBP15.96■□□□□ 0.15
TPM3-216ENST00000473036 NUCB1Q02818 461 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms