RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MYH2Q9UKX2 1941 aa17.29■□□□□ 0.36
HIF3A-206ENST00000472815 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-206ENST00000472815 ATP8A2Q9NTI2 1148 aa17.28■□□□□ 0.36
HIF3A-206ENST00000472815 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
HIF3A-206ENST00000472815 SRCAPQ6ZRS2 3230 aa17.28■□□□□ 0.36
HIF3A-206ENST00000472815 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.36
HIF3A-206ENST00000472815 PLCG2P16885 1265 aa17.27■□□□□ 0.36
HIF3A-206ENST00000472815 Q6ZUG5 572 aa17.27■□□□□ 0.36
HIF3A-206ENST00000472815 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
HIF3A-206ENST00000472815 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
HIF3A-206ENST00000472815 FBXL16Q8N461 479 aa17.27■□□□□ 0.36
HIF3A-206ENST00000472815 KRT23Q9C075 422 aa17.27■□□□□ 0.36
HIF3A-206ENST00000472815 GTF2IP78347 998 aa17.27■□□□□ 0.35
HIF3A-206ENST00000472815 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.35
HIF3A-206ENST00000472815 TOB2Q14106 344 aaPredicted RBP17.27■□□□□ 0.35
HIF3A-206ENST00000472815 CCDC93Q567U6 631 aa17.27■□□□□ 0.35
HIF3A-206ENST00000472815 ZNF384Q8TF68 577 aa17.27■□□□□ 0.35
HIF3A-206ENST00000472815 C7orf43Q8WVR3 580 aa17.27■□□□□ 0.35
HIF3A-206ENST00000472815 AATFQ9NY61 560 aaKnown RBP eCLIP17.27■□□□□ 0.35
HIF3A-206ENST00000472815 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
HIF3A-206ENST00000472815 PCP11498 1178 aaKnown RBP17.26■□□□□ 0.35
HIF3A-206ENST00000472815 PDIA4P13667 645 aaKnown RBP17.26■□□□□ 0.35
HIF3A-206ENST00000472815 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
HIF3A-206ENST00000472815 MFSD6Q6ZSS7 791 aa17.26■□□□□ 0.35
HIF3A-206ENST00000472815 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
HIF3A-206ENST00000472815 AGXT2Q9BYV1 514 aa17.26■□□□□ 0.35
HIF3A-206ENST00000472815 PRKAB2O43741 272 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 SLC3A2P08195 630 aaKnown RBP17.25■□□□□ 0.35
HIF3A-206ENST00000472815 PPP4CP60510 307 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 DYNLL1P63167 89 aaKnown RBP17.25■□□□□ 0.35
HIF3A-206ENST00000472815 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 SDR42E1Q8WUS8 393 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 FBXW7Q969H0 707 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-206ENST00000472815 ARPP21Q9UBL0 812 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-206ENST00000472815 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
HIF3A-206ENST00000472815 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 MB21D2Q8IYB1 491 aaPredicted RBP17.24■□□□□ 0.35
HIF3A-206ENST00000472815 STAG1Q8WVM7 1258 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 BRF1Q92994 677 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 FAM163AQ96GL9 167 aaPredicted RBP17.24■□□□□ 0.35
HIF3A-206ENST00000472815 FHDC1Q9C0D6 1143 aaPredicted RBP17.24■□□□□ 0.35
HIF3A-206ENST00000472815 TPCN1Q9ULQ1 816 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 LAMB1P07942 1786 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 A0A0G2JLW4 131 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 PRC1O43663 620 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 DPEP1P16444 411 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 NT5C2P49902 561 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 FKBP1AP62942 108 aaKnown RBP17.24■□□□□ 0.35
HIF3A-206ENST00000472815 PPARAQ07869 468 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 ME3Q16798 604 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 DOK7Q18PE1 504 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 GBP4Q96PP9 640 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 PIM2Q9P1W9 311 aa17.24■□□□□ 0.35
HIF3A-206ENST00000472815 BAZ2AQ9UIF9 1905 aaKnown RBP17.23■□□□□ 0.35
HIF3A-206ENST00000472815 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 C21orf2O43822 256 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 USP5P45974 858 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
HIF3A-206ENST00000472815 TBC1D10CQ8IV04 446 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 CCDC83Q8IWF9 413 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 PSMD1Q99460 953 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 MTA3Q9BTC8 594 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
HIF3A-206ENST00000472815 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
HIF3A-206ENST00000472815 NFKBIBQ15653 356 aa17.22■□□□□ 0.35
HIF3A-206ENST00000472815 STRIP1Q5VSL9 837 aa17.22■□□□□ 0.35
HIF3A-206ENST00000472815 ZNF274Q96GC6 653 aaPredicted RBP17.22■□□□□ 0.35
HIF3A-206ENST00000472815 LARP6Q9BRS8 491 aaKnown RBP17.22■□□□□ 0.35
HIF3A-206ENST00000472815 GPR75-ASB3A0A0A6YYF3 556 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 ECE2O60344 883 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 KCNA3P22001 575 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 SBK1Q52WX2 424 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 SNED1Q8TER0 1413 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 DBNDD1Q9H9R9 158 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-206ENST00000472815 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 LARGE1O95461 756 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 BTDP43251 543 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 CTDSPL2Q05D32 466 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 ESR2Q92731 530 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 KIF3AQ9Y496 699 aa17.21■□□□□ 0.35
HIF3A-206ENST00000472815 GAKO14976 1311 aa17.2■□□□□ 0.34
HIF3A-206ENST00000472815 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
HIF3A-206ENST00000472815 NAV1Q8NEY1 1877 aa17.2■□□□□ 0.34
HIF3A-206ENST00000472815 ERICH2A1L162 156 aa17.2■□□□□ 0.34
HIF3A-206ENST00000472815 B4E1Z4 1266 aa17.2■□□□□ 0.34
HIF3A-206ENST00000472815 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
HIF3A-206ENST00000472815 PDCP20941 246 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms