RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 IL27Q8NEV9 243 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 JARID2Q92833 1246 aaPredicted RBP7.59□□□□□ -1.19
SIK3-208ENST00000472648 COA7Q96BR5 231 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 C1QTNF1Q9BXJ1 281 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
SIK3-208ENST00000472648 BABAM1Q9NWV8 329 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 CWC25Q9NXE8 425 aaPredicted RBP7.59□□□□□ -1.19
SIK3-208ENST00000472648 DBF4Q9UBU7 674 aaPredicted RBP7.59□□□□□ -1.19
SIK3-208ENST00000472648 TIMELESSQ9UNS1 1208 aa7.59□□□□□ -1.19
SIK3-208ENST00000472648 ARIH1Q9Y4X5 557 aaPredicted RBP7.59□□□□□ -1.19
SIK3-208ENST00000472648 CYP2C8P10632 490 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 DCAF15Q66K64 600 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 ADAMTS19Q8TE59 1207 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 UHRF1Q96T88 793 aaPredicted RBP7.58□□□□□ -1.2
SIK3-208ENST00000472648 MPHOSPH8Q99549 860 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 MYD88Q99836 296 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 TTYH1Q9H313 450 aaPredicted RBP7.58□□□□□ -1.2
SIK3-208ENST00000472648 GREM2Q9H772 168 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 HYPKQ9NX55 129 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 JAG2Q9Y219 1238 aa7.58□□□□□ -1.2
SIK3-208ENST00000472648 LRRC26Q2I0M4 334 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 DZIP1LQ8IYY4 767 aaKnown RBP7.57□□□□□ -1.2
SIK3-208ENST00000472648 USP38Q8NB14 1042 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 TTLL11Q8NHH1 800 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 SMCR8Q8TEV9 937 aaPredicted RBP7.57□□□□□ -1.2
SIK3-208ENST00000472648 ATXN2LQ8WWM7 1075 aaKnown RBP7.57□□□□□ -1.2
SIK3-208ENST00000472648 THEGQ9P2T0 379 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 PRKAG2Q9UGJ0 569 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 SERPINA10Q9UK55 444 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 OGDHLQ9ULD0 1010 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 TTF2Q9UNY4 1162 aaKnown RBP7.57□□□□□ -1.2
SIK3-208ENST00000472648 KCNH4Q9UQ05 1017 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 CACNA1FO60840 1977 aa7.57□□□□□ -1.2
SIK3-208ENST00000472648 IL1R1P14778 569 aa7.56□□□□□ -1.2
SIK3-208ENST00000472648 SMAD3P84022 425 aaKnown RBP7.56□□□□□ -1.2
SIK3-208ENST00000472648 KRT24Q2M2I5 525 aa7.56□□□□□ -1.2
SIK3-208ENST00000472648 ZNF341Q9BYN7 854 aa7.56□□□□□ -1.2
SIK3-208ENST00000472648 PNNQ9H307 717 aaKnown RBP7.56□□□□□ -1.2
SIK3-208ENST00000472648 TMOD2Q9NZR1 351 aa7.56□□□□□ -1.2
SIK3-208ENST00000472648 PIEZO1Q92508 2521 aa7.56□□□□□ -1.2
SIK3-208ENST00000472648 RPAP1Q9BWH6 1393 aaPredicted RBP7.56□□□□□ -1.2
SIK3-208ENST00000472648 XIRP2A4UGR9 3374 aa7.56□□□□□ -1.2
SIK3-208ENST00000472648 MUC6Q6W4X9 2439 aa7.56□□□□□ -1.2
SIK3-208ENST00000472648 MYH2Q9UKX2 1941 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 HOXB7P09629 217 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 COL6A1P12109 1028 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 PPP2R1AP30153 589 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 INPP5BP32019 993 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 CRKP46108 304 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 CHRNDQ07001 517 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 MOGSQ13724 837 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 SHHQ15465 462 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 MFSD14BQ5SR56 506 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 ASB2Q96Q27 587 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 LRRC37A2A6NM11 1700 aa7.55□□□□□ -1.2
SIK3-208ENST00000472648 CACNB3P54284 484 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 MRPS5P82675 430 aaKnown RBP7.54□□□□□ -1.2
SIK3-208ENST00000472648 LMOD3Q0VAK6 560 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 TRIM32Q13049 653 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 GADL1Q6ZQY3 521 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 MIGA2Q7L4E1 593 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 FASTKD5Q7L8L6 764 aaKnown RBP7.54□□□□□ -1.2
SIK3-208ENST00000472648 FAM83AQ86UY5 434 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 ALYREFQ86V81 257 aaKnown RBP7.54□□□□□ -1.2
SIK3-208ENST00000472648 ANKRD13CQ8N6S4 541 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 PPM1EQ8WY54 764 aa7.54□□□□□ -1.2
SIK3-208ENST00000472648 LAS1LQ9Y4W2 734 aaKnown RBP7.54□□□□□ -1.2
SIK3-208ENST00000472648 CXCL11O14625 94 aa7.53□□□□□ -1.2
SIK3-208ENST00000472648 TAF5LO75529 589 aa7.53□□□□□ -1.2
SIK3-208ENST00000472648 DDX58O95786 925 aaKnown RBP7.53□□□□□ -1.2
SIK3-208ENST00000472648 PRKAR2AP13861 404 aaKnown RBP7.53□□□□□ -1.2
SIK3-208ENST00000472648 ITGA6P23229 1130 aa7.53□□□□□ -1.2
SIK3-208ENST00000472648 RIPK4P57078 832 aa7.53□□□□□ -1.2
SIK3-208ENST00000472648 C9orf50Q5SZB4 431 aa7.53□□□□□ -1.2
SIK3-208ENST00000472648 C15orf52Q6ZUT6 534 aaKnown RBP7.53□□□□□ -1.2
SIK3-208ENST00000472648 GAS2L1Q99501 681 aaPredicted RBP7.53□□□□□ -1.2
SIK3-208ENST00000472648 LRFN3Q9BTN0 628 aa7.53□□□□□ -1.2
SIK3-208ENST00000472648 SLC45A1Q9Y2W3 748 aa7.53□□□□□ -1.2
SIK3-208ENST00000472648 CDK5RAP2Q96SN8 1893 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 A0A0G2JLL6 359 aaPredicted RBP7.52□□□□□ -1.21
SIK3-208ENST00000472648 SNAP23O00161 211 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 GRIN2CQ14957 1233 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 FAM110CQ1W6H9 321 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 NOL9Q5SY16 702 aaKnown RBP7.52□□□□□ -1.21
SIK3-208ENST00000472648 PRRT2Q7Z6L0 340 aaPredicted RBP7.52□□□□□ -1.21
SIK3-208ENST00000472648 TRIB2Q92519 343 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 TEKT1Q969V4 418 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 METTL22Q9BUU2 404 aaPredicted RBP7.52□□□□□ -1.21
SIK3-208ENST00000472648 SENP6Q9GZR1 1112 aaPredicted RBP7.52□□□□□ -1.21
SIK3-208ENST00000472648 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
SIK3-208ENST00000472648 PNMA3Q9UL41 463 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 WDFY4Q6ZS81 3184 aa7.52□□□□□ -1.21
SIK3-208ENST00000472648 CACNA1AO00555 2505 aa7.51□□□□□ -1.21
SIK3-208ENST00000472648 ATN1P54259 1190 aaPredicted RBP7.51□□□□□ -1.21
SIK3-208ENST00000472648 TMEM31Q5JXX7 168 aa7.51□□□□□ -1.21
SIK3-208ENST00000472648 MAP3K21Q5TCX8 1036 aa7.51□□□□□ -1.21
SIK3-208ENST00000472648 FKBP1CQ5VVH2 108 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms