RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
SPC25-203ENST00000472216 SULT6B1Q6IMI4 303 aa13.24□□□□□ -0.29
SPC25-203ENST00000472216 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
SPC25-203ENST00000472216 MAP1BP46821 2468 aaKnown RBP13.24□□□□□ -0.29
SPC25-203ENST00000472216 ASH1LQ9NR48 2969 aaKnown RBP13.23□□□□□ -0.29
SPC25-203ENST00000472216 ZNF804BA4D1E1 1349 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 SPDYE5A6NIY4 337 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 PROB1E7EW31 1015 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 IRF6O14896 467 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 PBX2P40425 430 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 FAM178BQ8IXR5 827 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 PARK7Q99497 189 aaKnown RBP13.23□□□□□ -0.29
SPC25-203ENST00000472216 ATP11BQ9Y2G3 1177 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 TRIOO75962 3097 aa13.23□□□□□ -0.29
SPC25-203ENST00000472216 CACNA1HO95180 2353 aa13.22□□□□□ -0.29
SPC25-203ENST00000472216 DMXL1Q9Y485 3027 aa13.22□□□□□ -0.29
SPC25-203ENST00000472216 TEFQ10587 303 aa13.22□□□□□ -0.29
SPC25-203ENST00000472216 PKN1Q16512 942 aa13.22□□□□□ -0.29
SPC25-203ENST00000472216 ERO1BQ86YB8 467 aa13.22□□□□□ -0.29
SPC25-203ENST00000472216 ZBED3Q96IU2 234 aaPredicted RBP13.22□□□□□ -0.29
SPC25-203ENST00000472216 MGAMO43451 1857 aa13.22□□□□□ -0.29
SPC25-203ENST00000472216 TRIM32Q13049 653 aa13.21□□□□□ -0.29
SPC25-203ENST00000472216 ZNF34Q8IZ26 560 aa13.21□□□□□ -0.29
SPC25-203ENST00000472216 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
SPC25-203ENST00000472216 MSRAQ9UJ68 235 aa13.21□□□□□ -0.29
SPC25-203ENST00000472216 LRRC37AA6NMS7 1700 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 PRR23AA6NEV1 266 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 EPHB4P54760 987 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 PARP10Q53GL7 1025 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 SLC28A3Q9HAS3 691 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 USP24Q9UPU5 2620 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 MAST2Q6P0Q8 1798 aa13.2□□□□□ -0.3
SPC25-203ENST00000472216 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
SPC25-203ENST00000472216 MYO1BO43795 1136 aa13.19□□□□□ -0.3
SPC25-203ENST00000472216 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
SPC25-203ENST00000472216 UFL1O94874 794 aa13.19□□□□□ -0.3
SPC25-203ENST00000472216 DLGAP5Q15398 846 aa13.19□□□□□ -0.3
SPC25-203ENST00000472216 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
SPC25-203ENST00000472216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPC25-203ENST00000472216 RMDN1Q96DB5 314 aa13.19□□□□□ -0.3
SPC25-203ENST00000472216 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
SPC25-203ENST00000472216 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
SPC25-203ENST00000472216 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
SPC25-203ENST00000472216 RAB30Q15771 203 aa13.18□□□□□ -0.3
SPC25-203ENST00000472216 KIF6Q6ZMV9 814 aa13.18□□□□□ -0.3
SPC25-203ENST00000472216 WDR87Q6ZQQ6 2873 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 GVINP1Q7Z2Y8 2422 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 HCLS1P14317 486 aaPredicted RBP13.17□□□□□ -0.3
SPC25-203ENST00000472216 PPIL2Q13356 520 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 RASA3Q14644 834 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 LHX8Q68G74 356 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 VPS13AQ96RL7 3174 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 DMDP11532 3685 aa13.17□□□□□ -0.3
SPC25-203ENST00000472216 OTOFQ9HC10 1997 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 PSME4Q14997 1843 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 TRIM43BA6NCK2 446 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 CYP2C8P10632 490 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
SPC25-203ENST00000472216 PUM1Q14671 1186 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPC25-203ENST00000472216 MAP3K21Q5TCX8 1036 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 TRIM43Q96BQ3 446 aaPredicted RBP13.16□□□□□ -0.3
SPC25-203ENST00000472216 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
SPC25-203ENST00000472216 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
SPC25-203ENST00000472216 POU3F3P20264 500 aaPredicted RBP13.15□□□□□ -0.3
SPC25-203ENST00000472216 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
SPC25-203ENST00000472216 KIAA0825Q8IV33 1275 aa13.15□□□□□ -0.3
SPC25-203ENST00000472216 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.15□□□□□ -0.3
SPC25-203ENST00000472216 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
SPC25-203ENST00000472216 MTCH2Q9Y6C9 303 aa13.15□□□□□ -0.3
SPC25-203ENST00000472216 NUP98P52948 1817 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 CLRN2A0PK11 232 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 FPGSQ05932 587 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 SH3RF1Q7Z6J0 888 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 SUGP1Q8IWZ8 645 aaKnown RBP13.14□□□□□ -0.31
SPC25-203ENST00000472216 ADSSL1Q8N142 457 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 PRRC2BQ5JSZ5 2229 aaKnown RBP13.14□□□□□ -0.31
SPC25-203ENST00000472216 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
SPC25-203ENST00000472216 KCNQ3O43525 872 aa13.13□□□□□ -0.31
SPC25-203ENST00000472216 NKX2-4Q9H2Z4 354 aa13.13□□□□□ -0.31
SPC25-203ENST00000472216 ZBTB3Q9H5J0 574 aa13.13□□□□□ -0.31
SPC25-203ENST00000472216 ASPMQ8IZT6 3477 aa13.12□□□□□ -0.31
SPC25-203ENST00000472216 PPATQ06203 517 aa13.12□□□□□ -0.31
SPC25-203ENST00000472216 CHAMP1Q96JM3 812 aa13.12□□□□□ -0.31
SPC25-203ENST00000472216 GAKO14976 1311 aa13.12□□□□□ -0.31
SPC25-203ENST00000472216 CEMIPQ8WUJ3 1361 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms