RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 GSTO1P78417 241 aa17.72■□□□□ 0.43
SMARCD3-207ENST00000472103 CDC42EP5Q6NZY7 148 aa17.72■□□□□ 0.43
SMARCD3-207ENST00000472103 USP50Q70EL3 339 aaPredicted RBP17.72■□□□□ 0.43
SMARCD3-207ENST00000472103 OSBP2Q969R2 916 aa17.72■□□□□ 0.43
SMARCD3-207ENST00000472103 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-207ENST00000472103 AATFQ9NY61 560 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMARCD3-207ENST00000472103 IGSF3O75054 1194 aa17.71■□□□□ 0.43
SMARCD3-207ENST00000472103 CACNB3P54284 484 aa17.71■□□□□ 0.43
SMARCD3-207ENST00000472103 UBE3CQ15386 1083 aa17.71■□□□□ 0.43
SMARCD3-207ENST00000472103 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
SMARCD3-207ENST00000472103 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMARCD3-207ENST00000472103 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
SMARCD3-207ENST00000472103 CDK5RAP2Q96SN8 1893 aa17.71■□□□□ 0.43
SMARCD3-207ENST00000472103 M0R2C6 588 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 ZMYM1Q5SVZ6 1142 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 ANGEL2Q5VTE6 544 aaKnown RBP17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 DLK2Q6UY11 383 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 SLF2Q8IX21 1173 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 SH3RF3Q8TEJ3 882 aaPredicted RBP17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 GGA3Q9NZ52 723 aa17.7■□□□□ 0.42
SMARCD3-207ENST00000472103 RFX7Q2KHR2 1363 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 PPP4CP60510 307 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 ZSCAN25Q6NSZ9 544 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 APPBP2Q92624 585 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 IL25Q9H293 177 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 ARMT1Q9H993 441 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 PGAP2Q9UHJ9 254 aa17.69■□□□□ 0.42
SMARCD3-207ENST00000472103 MBD4O95243 580 aa17.68■□□□□ 0.42
SMARCD3-207ENST00000472103 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
SMARCD3-207ENST00000472103 NFIAQ12857 509 aa17.68■□□□□ 0.42
SMARCD3-207ENST00000472103 CCDC129Q6ZRS4 1044 aa17.68■□□□□ 0.42
SMARCD3-207ENST00000472103 PNMA8AQ86V59 439 aaPredicted RBP17.68■□□□□ 0.42
SMARCD3-207ENST00000472103 DDX4Q9NQI0 724 aaKnown RBP17.68■□□□□ 0.42
SMARCD3-207ENST00000472103 CLEC11AQ9Y240 323 aa17.68■□□□□ 0.42
SMARCD3-207ENST00000472103 MAGEB6P1A0A0J9YX57 407 aa17.67■□□□□ 0.42
SMARCD3-207ENST00000472103 WDHD1O75717 1129 aaPredicted RBP17.67■□□□□ 0.42
SMARCD3-207ENST00000472103 MAP1SQ66K74 1059 aaPredicted RBP17.67■□□□□ 0.42
SMARCD3-207ENST00000472103 VEZTQ9HBM0 779 aa17.67■□□□□ 0.42
SMARCD3-207ENST00000472103 FOCADQ5VW36 1801 aa17.67■□□□□ 0.42
SMARCD3-207ENST00000472103 TCP10L2B9ZVM9 353 aa17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 PRKAB2O43741 272 aa17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 CHMLP26374 656 aa17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 FMR1Q06787 632 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 TMED8Q6PL24 325 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 LDHDQ86WU2 507 aa17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 ZFPM1Q8IX07 1006 aa17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 FAM198AQ9UFP1 575 aa17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
SMARCD3-207ENST00000472103 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 BAG3O95817 575 aa17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 CWC27Q6UX04 472 aaKnown RBP17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 CDAN1Q8IWY9 1227 aa17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 ZC3H15Q8WU90 426 aaKnown RBP17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 NOL10Q9BSC4 688 aaKnown RBP17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 GLIS2Q9BZE0 524 aaPredicted RBP17.65■□□□□ 0.42
SMARCD3-207ENST00000472103 GPAA1O43292 621 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 MYO1BO43795 1136 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 LRRFIP1Q32MZ4 808 aaKnown RBP17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 PRAMEF18Q5VWM3 479 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 TGFBRAP1Q8WUH2 860 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 SDR42E1Q8WUS8 393 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 STRBPQ96SI9 672 aaKnown RBP17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 IDI2Q9BXS1 227 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 DIAPH3Q9NSV4 1193 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 PITPNM2Q9BZ72 1349 aa17.64■□□□□ 0.41
SMARCD3-207ENST00000472103 FOXP2O15409 715 aa17.63■□□□□ 0.41
SMARCD3-207ENST00000472103 TCP10Q12799 353 aa17.63■□□□□ 0.41
SMARCD3-207ENST00000472103 PICALMQ13492 652 aa17.63■□□□□ 0.41
SMARCD3-207ENST00000472103 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
SMARCD3-207ENST00000472103 MAPKAPK5Q8IW41 473 aa17.63■□□□□ 0.41
SMARCD3-207ENST00000472103 AIDAQ96BJ3 306 aa17.63■□□□□ 0.41
SMARCD3-207ENST00000472103 DCPSQ96C86 337 aaKnown RBP17.63■□□□□ 0.41
SMARCD3-207ENST00000472103 DDX60LQ5H9U9 1706 aaKnown RBP17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 TRAF5O00463 557 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 PLCG2P16885 1265 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 RASA3Q14644 834 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 MCMDC2Q4G0Z9 681 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 VPS53Q5VIR6 699 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 SH3BP5LQ7L8J4 393 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 TMEM39BQ9GZU3 492 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 TMOD2Q9NZR1 351 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 NAV1Q8NEY1 1877 aa17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 BAZ2AQ9UIF9 1905 aaKnown RBP17.62■□□□□ 0.41
SMARCD3-207ENST00000472103 MYH1P12882 1939 aa17.61■□□□□ 0.41
SMARCD3-207ENST00000472103 HIP1O00291 1037 aa17.61■□□□□ 0.41
SMARCD3-207ENST00000472103 SLURP2P0DP57 97 aa17.61■□□□□ 0.41
SMARCD3-207ENST00000472103 EVX2Q03828 476 aa17.61■□□□□ 0.41
SMARCD3-207ENST00000472103 KRT26Q7Z3Y9 468 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms