RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 TNS2Q63HR2 1409 aa3.6□□□□□ -1.83
DMD-219ENST00000471779 MEGF6O75095 1541 aa3.6□□□□□ -1.83
DMD-219ENST00000471779 PEAK1Q9H792 1746 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 CRYBG1Q9Y4K1 1723 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 RGPD2P0DJD1 1756 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 MEN1O00255 615 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 IPO8O15397 1037 aaKnown RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 KCNQ3O43525 872 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 GIGYF1O75420 1035 aaPredicted RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 DDX58O95786 925 aaKnown RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 F11P03951 625 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 HOXB7P09629 217 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 CYP19A1P11511 503 aaPredicted RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 MYL6BP14649 208 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 SSFA2P28290 1259 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 IL6STP40189 918 aaPredicted RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 CRKLP46109 303 aaKnown RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 KCNQ4P56696 695 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 AIMP1Q12904 312 aaKnown RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 R3HDM1Q15032 1099 aaKnown RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 TWISTNBQ3B726 338 aaPredicted RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 HDGFL1Q5TGJ6 251 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 DUSP27Q5VZP5 1158 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 KIF6Q6ZMV9 814 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 FOXD4L4Q8WXT5 416 aaPredicted RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 YTHDC1Q96MU7 727 aaKnown RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 SPON1Q9HCB6 807 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 DBF4Q9UBU7 674 aaPredicted RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 TBC1D2BQ9UPU7 963 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 MTMR7Q9Y216 660 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 ZNF652Q9Y2D9 606 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 PARP3Q9Y6F1 533 aa3.59□□□□□ -1.83
DMD-219ENST00000471779 SOS1Q07889 1333 aaPredicted RBP3.59□□□□□ -1.83
DMD-219ENST00000471779 NCAPD2Q15021 1401 aa3.59□□□□□ -1.84
DMD-219ENST00000471779 RAD21O60216 631 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 LILRA1O75019 489 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 A1BGP04217 495 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 ZNF853P0CG23 659 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 HSP90B1P14625 803 aaKnown RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 CTBSQ01459 385 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 EXOSC9Q06265 439 aaKnown RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 SLFN5Q08AF3 891 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 NEXNQ0ZGT2 675 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 HSP90AB3PQ58FF7 597 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 NBPF10Q6P3W6 841 aaKnown RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 CLEC4GQ6UXB4 293 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 TPTE2Q6XPS3 522 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 DZIP3Q86Y13 1208 aaKnown RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 NBPF15Q8N660 670 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 BANK1Q8NDB2 785 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 CCDC97Q96F63 343 aaPredicted RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 ABHD17AQ96GS6 310 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 SETDB2Q96T68 719 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 GZF1Q9H116 711 aaPredicted RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 TMX4Q9H1E5 349 aaPredicted RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 TIMMDC1Q9NPL8 285 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 RNF112Q9ULX5 631 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 HDAC5Q9UQL6 1122 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 CEMIPQ8WUJ3 1361 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 HEG1Q9ULI3 1381 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 NRAPQ86VF7 1730 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 PARP4Q9UKK3 1724 aaKnown RBP3.58□□□□□ -1.84
DMD-219ENST00000471779 BRWD3Q6RI45 1802 aa3.58□□□□□ -1.84
DMD-219ENST00000471779 LILRB3O75022 631 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 VAMP4O75379 141 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 COL3A1P02461 1466 aaPredicted RBP3.57□□□□□ -1.84
DMD-219ENST00000471779 CT47B1P0C2W7 299 aaPredicted RBP3.57□□□□□ -1.84
DMD-219ENST00000471779 FGFR3P22607 806 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 ITPK1Q13572 414 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 GRIK4Q16099 956 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 USPL1Q5W0Q7 1092 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 INTS5Q6P9B9 1019 aaKnown RBP3.57□□□□□ -1.84
DMD-219ENST00000471779 BICDL1Q6ZP65 573 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 COPS6Q7L5N1 327 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 PPP1R42Q7Z4L9 355 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 COL23A1Q86Y22 540 aaPredicted RBP3.57□□□□□ -1.84
DMD-219ENST00000471779 C8orf58Q8NAV2 365 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 LINC00116Q8NCU8 138 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 TSC1Q92574 1164 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 TSR2Q969E8 191 aaKnown RBP3.57□□□□□ -1.84
DMD-219ENST00000471779 CNTNAP4Q9C0A0 1308 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 MTFR1LQ9H019 292 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 DDX21Q9NR30 783 aaKnown RBP eCLIP3.57□□□□□ -1.84
DMD-219ENST00000471779 NARFQ9UHQ1 456 aa3.57□□□□□ -1.84
DMD-219ENST00000471779 CDV3Q9UKY7 258 aaKnown RBP3.57□□□□□ -1.84
DMD-219ENST00000471779 THSD7AQ9UPZ6 1657 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 PRAMEF22A3QJZ6 481 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 SPDYE3A6NKU9 549 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 FAM177BA6PVY3 158 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 ERVV-1B6SEH8 477 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 TCERG1O14776 1098 aaKnown RBP3.56□□□□□ -1.84
DMD-219ENST00000471779 ZBTB7AO95365 584 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 SERPINB2P05120 415 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 CENPBP07199 599 aaPredicted RBP3.56□□□□□ -1.84
DMD-219ENST00000471779 ARAFP10398 606 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 SSTR4P31391 388 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 GPC1P35052 558 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 ABL2P42684 1182 aa3.56□□□□□ -1.84
DMD-219ENST00000471779 EIF5P55010 431 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms