RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 LRP2BPQ9P2M1 347 aa12.37□□□□□ -0.43
APLF-204ENST00000471727 ZNF804BA4D1E1 1349 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 ERICH2A1L162 156 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 GSG1L2A8MUP6 293 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 B4E1Z4 1266 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 GOLGA6L19H0YKK7 550 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 SPTLC2O15270 562 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
APLF-204ENST00000471727 CDC25BP30305 580 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
APLF-204ENST00000471727 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 CEBPZQ03701 1054 aaKnown RBP12.36□□□□□ -0.43
APLF-204ENST00000471727 SNW1Q13573 536 aaKnown RBP12.36□□□□□ -0.43
APLF-204ENST00000471727 CAVIN4Q5BKX8 364 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 ALG1Q9BT22 464 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 DENND2AQ9ULE3 1009 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 PCDHA7Q9UN72 937 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
APLF-204ENST00000471727 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
APLF-204ENST00000471727 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 GOLGA8AA7E2F4 631 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 IFIT3O14879 490 aaKnown RBP12.35□□□□□ -0.43
APLF-204ENST00000471727 PPP6R2O75170 966 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 TDO2P48775 406 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 BCAMP50895 628 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 FOSBP53539 338 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 ANO1Q5XXA6 986 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 SARM1Q6SZW1 724 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 FMR1NBQ8N0W7 255 aaPredicted RBP12.35□□□□□ -0.43
APLF-204ENST00000471727 ANAPC4Q9UJX5 808 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 LAMB2P55268 1798 aa12.35□□□□□ -0.43
APLF-204ENST00000471727 IFNAR1P17181 557 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 CMA1P23946 247 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 NT5C2P49902 561 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
APLF-204ENST00000471727 SLC39A14Q15043 492 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 ZRSR1Q15695 479 aaKnown RBP12.34□□□□□ -0.43
APLF-204ENST00000471727 VPS72Q15906 364 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 LUZP1Q86V48 1076 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 TIGD1Q96MW7 591 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
APLF-204ENST00000471727 EPB41L4AQ9HCS5 686 aaPredicted RBP12.34□□□□□ -0.43
APLF-204ENST00000471727 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
APLF-204ENST00000471727 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.43
APLF-204ENST00000471727 NTRK3Q16288 839 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 PLA2G4DQ86XP0 818 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 TRIM22Q8IYM9 498 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 CEP57L1Q8IYX8 460 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 SDF4Q9BRK5 362 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 DNAJC25Q9H1X3 360 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.43
APLF-204ENST00000471727 SPTLC3Q9NUV7 552 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.43
APLF-204ENST00000471727 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.43
APLF-204ENST00000471727 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 TIAM2Q8IVF5 1701 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 NEDD4P46934 1319 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 BECN2A8MW95 431 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 AP5Z1O43299 807 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 NEMFO60524 1076 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 CYP7A1P22680 504 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 U2AF2P26368 475 aaKnown RBP eCLIP12.33□□□□□ -0.44
APLF-204ENST00000471727 ZNF75DP51815 510 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 RBM6P78332 1123 aaKnown RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 GNL2Q13823 731 aaKnown RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 DHX8Q14562 1220 aaKnown RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 WTAPQ15007 396 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 IQCB1Q15051 598 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
APLF-204ENST00000471727 KRT40Q6A162 431 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 BPIFA3Q9BQP9 254 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.44
APLF-204ENST00000471727 TRIM5Q9C035 493 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 CLIC4Q9Y696 253 aa12.33□□□□□ -0.44
APLF-204ENST00000471727 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 FAM237AA0A1B0GTK4 181 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 GTF2E1P29083 439 aaPredicted RBP12.32□□□□□ -0.44
APLF-204ENST00000471727 ERFEQ4G0M1 354 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 VPS37DQ86XT2 251 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 ELOA2Q8IYF1 753 aaPredicted RBP12.32□□□□□ -0.44
APLF-204ENST00000471727 LCORLQ8N3X6 602 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 ESR2Q92731 530 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 MRFAP1L1Q96HT8 127 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms