RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PITPNM2Q9BZ72 1349 aa16.97■□□□□ 0.31
SSR4-207ENST00000471724 EGFRP00533 1210 aa16.97■□□□□ 0.31
SSR4-207ENST00000471724 CYP7A1P22680 504 aa16.97■□□□□ 0.31
SSR4-207ENST00000471724 ADD2P35612 726 aa16.97■□□□□ 0.31
SSR4-207ENST00000471724 UBE3CQ15386 1083 aa16.97■□□□□ 0.31
SSR4-207ENST00000471724 ZNF384Q8TF68 577 aa16.97■□□□□ 0.31
SSR4-207ENST00000471724 TMOD2Q9NZR1 351 aa16.97■□□□□ 0.31
SSR4-207ENST00000471724 BAG3O95817 575 aa16.96■□□□□ 0.31
SSR4-207ENST00000471724 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
SSR4-207ENST00000471724 PLCG2P16885 1265 aa16.96■□□□□ 0.31
SSR4-207ENST00000471724 BTDP43251 543 aa16.96■□□□□ 0.31
SSR4-207ENST00000471724 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
SSR4-207ENST00000471724 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
SSR4-207ENST00000471724 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.3
SSR4-207ENST00000471724 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.3
SSR4-207ENST00000471724 GPR75-ASB3A0A0A6YYF3 556 aa16.95■□□□□ 0.3
SSR4-207ENST00000471724 HIP1O00291 1037 aa16.95■□□□□ 0.3
SSR4-207ENST00000471724 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
SSR4-207ENST00000471724 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
SSR4-207ENST00000471724 BMP2KLQ5H9B9 411 aa16.95■□□□□ 0.3
SSR4-207ENST00000471724 APOBEC3FQ8IUX4 373 aaKnown RBP16.95■□□□□ 0.3
SSR4-207ENST00000471724 APPBP2Q92624 585 aa16.95■□□□□ 0.3
SSR4-207ENST00000471724 TRPM7Q96QT4 1865 aa16.95■□□□□ 0.3
SSR4-207ENST00000471724 MYH1P12882 1939 aa16.94■□□□□ 0.3
SSR4-207ENST00000471724 TCRBV5S4A2TA0A5A2 114 aa16.94■□□□□ 0.3
SSR4-207ENST00000471724 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
SSR4-207ENST00000471724 HIRAP54198 1017 aaPredicted RBP16.94■□□□□ 0.3
SSR4-207ENST00000471724 TNFAIP1Q13829 316 aa16.94■□□□□ 0.3
SSR4-207ENST00000471724 APOBEC3HQ6NTF7 200 aaKnown RBP16.94■□□□□ 0.3
SSR4-207ENST00000471724 DCPSQ96C86 337 aaKnown RBP16.94■□□□□ 0.3
SSR4-207ENST00000471724 PRMT6Q96LA8 375 aaPredicted RBP16.94■□□□□ 0.3
SSR4-207ENST00000471724 LAMB1P07942 1786 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 ITGBL1O95965 494 aaPredicted RBP16.93■□□□□ 0.3
SSR4-207ENST00000471724 SDSP20132 328 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 ANGEL2Q5VTE6 544 aaKnown RBP16.93■□□□□ 0.3
SSR4-207ENST00000471724 FKBP1CQ5VVH2 108 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 MAP1SQ66K74 1059 aaPredicted RBP16.93■□□□□ 0.3
SSR4-207ENST00000471724 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 SKAP1Q86WV1 359 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 TDRD3Q9H7E2 651 aaKnown RBP16.93■□□□□ 0.3
SSR4-207ENST00000471724 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 PGAP2Q9UHJ9 254 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 PASKQ96RG2 1323 aa16.93■□□□□ 0.3
SSR4-207ENST00000471724 RPAP1Q9BWH6 1393 aaPredicted RBP16.92■□□□□ 0.3
SSR4-207ENST00000471724 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
SSR4-207ENST00000471724 CLRN2A0PK11 232 aa16.92■□□□□ 0.3
SSR4-207ENST00000471724 TNNI2P48788 182 aa16.92■□□□□ 0.3
SSR4-207ENST00000471724 PPP4CP60510 307 aa16.92■□□□□ 0.3
SSR4-207ENST00000471724 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
SSR4-207ENST00000471724 VEZTQ9HBM0 779 aa16.92■□□□□ 0.3
SSR4-207ENST00000471724 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
SSR4-207ENST00000471724 AATFQ9NY61 560 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSR4-207ENST00000471724 ZNF70Q9UC06 446 aaPredicted RBP16.92■□□□□ 0.3
SSR4-207ENST00000471724 COL2A1P02458 1487 aaPredicted RBP16.92■□□□□ 0.3
SSR4-207ENST00000471724 ZMYM1Q5SVZ6 1142 aa16.91■□□□□ 0.3
SSR4-207ENST00000471724 CDC42EP5Q6NZY7 148 aa16.91■□□□□ 0.3
SSR4-207ENST00000471724 MIGA1Q8NAN2 632 aa16.91■□□□□ 0.3
SSR4-207ENST00000471724 AIDAQ96BJ3 306 aa16.91■□□□□ 0.3
SSR4-207ENST00000471724 USP40Q9NVE5 1235 aa16.91■□□□□ 0.3
SSR4-207ENST00000471724 PPP2R3BQ9Y5P8 575 aa16.91■□□□□ 0.3
SSR4-207ENST00000471724 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
SSR4-207ENST00000471724 TMEM88BA6NKF7 163 aa16.9■□□□□ 0.3
SSR4-207ENST00000471724 RHBDL3P58872 404 aa16.9■□□□□ 0.3
SSR4-207ENST00000471724 TEX11Q8IYF3 940 aa16.9■□□□□ 0.3
SSR4-207ENST00000471724 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
SSR4-207ENST00000471724 KLRG1Q96E93 195 aa16.9■□□□□ 0.3
SSR4-207ENST00000471724 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
SSR4-207ENST00000471724 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
SSR4-207ENST00000471724 ASTN2O75129 1339 aaPredicted RBP16.9■□□□□ 0.3
SSR4-207ENST00000471724 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
SSR4-207ENST00000471724 MBD4O95243 580 aa16.89■□□□□ 0.29
SSR4-207ENST00000471724 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
SSR4-207ENST00000471724 KRT26Q7Z3Y9 468 aa16.89■□□□□ 0.29
SSR4-207ENST00000471724 FAM83AQ86UY5 434 aa16.89■□□□□ 0.29
SSR4-207ENST00000471724 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.29
SSR4-207ENST00000471724 IDI2Q9BXS1 227 aa16.89■□□□□ 0.29
SSR4-207ENST00000471724 HELLSQ9NRZ9 838 aa16.89■□□□□ 0.29
SSR4-207ENST00000471724 RAD50Q92878 1312 aa16.89■□□□□ 0.29
SSR4-207ENST00000471724 MYH8P13535 1937 aa16.88■□□□□ 0.29
SSR4-207ENST00000471724 ENTPD3O75355 529 aa16.88■□□□□ 0.29
SSR4-207ENST00000471724 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
SSR4-207ENST00000471724 DYNLL1P63167 89 aaKnown RBP16.88■□□□□ 0.29
SSR4-207ENST00000471724 HTRA3P83110 453 aa16.88■□□□□ 0.29
SSR4-207ENST00000471724 RUFY2Q8WXA3 655 aa16.88■□□□□ 0.29
SSR4-207ENST00000471724 OSBP2Q969R2 916 aa16.88■□□□□ 0.29
SSR4-207ENST00000471724 PUS7LQ9H0K6 701 aaKnown RBP16.88■□□□□ 0.29
SSR4-207ENST00000471724 LAMA4Q16363 1823 aa16.88■□□□□ 0.29
SSR4-207ENST00000471724 TCP10L2B9ZVM9 353 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 GPAA1O43292 621 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 WDHD1O75717 1129 aaPredicted RBP16.87■□□□□ 0.29
SSR4-207ENST00000471724 CHGBP05060 677 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 GNAT2P19087 354 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 CACNB3P54284 484 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 NMIQ13287 307 aaPredicted RBP16.87■□□□□ 0.29
SSR4-207ENST00000471724 SLFNL1Q499Z3 407 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 CASC1Q6TDU7 716 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 LCORLQ8N3X6 602 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
SSR4-207ENST00000471724 ARMT1Q9H993 441 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms