RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 CNKSR2Q8WXI2 1034 aa23.34■■□□□ 1.33
COMMD1-207ENST00000471704 C1orf115Q9H7X2 142 aa23.34■■□□□ 1.33
COMMD1-207ENST00000471704 TMOD2Q9NZR1 351 aa23.34■■□□□ 1.33
COMMD1-207ENST00000471704 PDE4DIPQ5VU43 2346 aa23.34■■□□□ 1.33
COMMD1-207ENST00000471704 A0A1B0GUL7 405 aa23.33■■□□□ 1.33
COMMD1-207ENST00000471704 ZBTB7BO15156 539 aaPredicted RBP23.33■■□□□ 1.33
COMMD1-207ENST00000471704 PRDX5P30044 214 aa23.33■■□□□ 1.33
COMMD1-207ENST00000471704 OTUD7BQ6GQQ9 843 aa23.33■■□□□ 1.33
COMMD1-207ENST00000471704 FTSJ3Q8IY81 847 aaKnown RBP23.33■■□□□ 1.33
COMMD1-207ENST00000471704 GNL3LQ9NVN8 582 aaKnown RBP23.33■■□□□ 1.33
COMMD1-207ENST00000471704 SALL1Q9NSC2 1324 aa23.33■■□□□ 1.32
COMMD1-207ENST00000471704 RPAP1Q9BWH6 1393 aaPredicted RBP23.32■■□□□ 1.32
COMMD1-207ENST00000471704 SEMA3EO15041 775 aa23.32■■□□□ 1.32
COMMD1-207ENST00000471704 CRHR2Q13324 411 aa23.32■■□□□ 1.32
COMMD1-207ENST00000471704 POLA2Q14181 598 aa23.32■■□□□ 1.32
COMMD1-207ENST00000471704 ITPRIPQ8IWB1 547 aa23.32■■□□□ 1.32
COMMD1-207ENST00000471704 DAGLAQ9Y4D2 1042 aa23.32■■□□□ 1.32
COMMD1-207ENST00000471704 DIXDC1Q155Q3 683 aa23.31■■□□□ 1.32
COMMD1-207ENST00000471704 BRI3BPQ8WY22 251 aa23.31■■□□□ 1.32
COMMD1-207ENST00000471704 XAGE2Q96GT9 111 aa23.31■■□□□ 1.32
COMMD1-207ENST00000471704 DENND2AQ9ULE3 1009 aa23.31■■□□□ 1.32
COMMD1-207ENST00000471704 CSADQ9Y600 493 aa23.31■■□□□ 1.32
COMMD1-207ENST00000471704 SPDYE5A6NIY4 337 aa23.3■■□□□ 1.32
COMMD1-207ENST00000471704 CDC42EP5Q6NZY7 148 aa23.3■■□□□ 1.32
COMMD1-207ENST00000471704 SSH3Q8TE77 659 aa23.3■■□□□ 1.32
COMMD1-207ENST00000471704 HOOK2Q96ED9 719 aa23.3■■□□□ 1.32
COMMD1-207ENST00000471704 SNCAIPQ9Y6H5 919 aa23.3■■□□□ 1.32
COMMD1-207ENST00000471704 LDHBP07195 334 aaKnown RBP23.29■■□□□ 1.32
COMMD1-207ENST00000471704 GTF2A2P52657 109 aa23.29■■□□□ 1.32
COMMD1-207ENST00000471704 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
COMMD1-207ENST00000471704 RASGRF1Q13972 1273 aa23.29■■□□□ 1.32
COMMD1-207ENST00000471704 PANK1Q8TE04 598 aa23.29■■□□□ 1.32
COMMD1-207ENST00000471704 FAM151AQ8WW52 585 aa23.29■■□□□ 1.32
COMMD1-207ENST00000471704 OTOP1Q7RTM1 612 aa23.28■■□□□ 1.32
COMMD1-207ENST00000471704 AKAP2Q9Y2D5 859 aa23.28■■□□□ 1.32
COMMD1-207ENST00000471704 CENPFP49454 3210 aa23.27■■□□□ 1.32
COMMD1-207ENST00000471704 CCL15-CCL14A0A0B4J2E2 113 aa23.27■■□□□ 1.32
COMMD1-207ENST00000471704 CCL15Q16663 113 aa23.27■■□□□ 1.32
COMMD1-207ENST00000471704 DCAF15Q66K64 600 aa23.27■■□□□ 1.32
COMMD1-207ENST00000471704 ERO1BQ86YB8 467 aa23.27■■□□□ 1.32
COMMD1-207ENST00000471704 ZKSCAN4Q969J2 545 aaPredicted RBP23.27■■□□□ 1.32
COMMD1-207ENST00000471704 OTUD5Q96G74 571 aa23.27■■□□□ 1.32
COMMD1-207ENST00000471704 WRNIP1Q96S55 665 aa23.27■■□□□ 1.32
COMMD1-207ENST00000471704 MYO5AQ9Y4I1 1855 aaKnown RBP23.27■■□□□ 1.32
COMMD1-207ENST00000471704 PDS5AQ29RF7 1337 aaKnown RBP23.27■■□□□ 1.32
COMMD1-207ENST00000471704 AK9Q5TCS8 1911 aa23.26■■□□□ 1.31
COMMD1-207ENST00000471704 NFIAQ12857 509 aa23.26■■□□□ 1.31
COMMD1-207ENST00000471704 ERO1AQ96HE7 468 aa23.26■■□□□ 1.31
COMMD1-207ENST00000471704 TRIM17Q9Y577 477 aa23.26■■□□□ 1.31
COMMD1-207ENST00000471704 DOCK2Q92608 1830 aa23.26■■□□□ 1.31
COMMD1-207ENST00000471704 CAP1Q01518 475 aa23.25■■□□□ 1.31
COMMD1-207ENST00000471704 G3BP1Q13283 466 aaKnown RBP eCLIP23.25■■□□□ 1.31
COMMD1-207ENST00000471704 MIGA2Q7L4E1 593 aa23.25■■□□□ 1.31
COMMD1-207ENST00000471704 FAM43AQ8N2R8 423 aa23.25■■□□□ 1.31
COMMD1-207ENST00000471704 NEUROD6Q96NK8 337 aa23.25■■□□□ 1.31
COMMD1-207ENST00000471704 ZNF341Q9BYN7 854 aa23.25■■□□□ 1.31
COMMD1-207ENST00000471704 FAM198AQ9UFP1 575 aa23.25■■□□□ 1.31
COMMD1-207ENST00000471704 ZNF112Q9UJU3 913 aa23.25■■□□□ 1.31
COMMD1-207ENST00000471704 SP3Q02447 781 aa23.24■■□□□ 1.31
COMMD1-207ENST00000471704 TCP10Q12799 353 aa23.24■■□□□ 1.31
COMMD1-207ENST00000471704 MVPQ14764 893 aaKnown RBP23.24■■□□□ 1.31
COMMD1-207ENST00000471704 PI16Q6UXB8 463 aa23.24■■□□□ 1.31
COMMD1-207ENST00000471704 ZGPATQ8N5A5 531 aaKnown RBP23.24■■□□□ 1.31
COMMD1-207ENST00000471704 CD99L2Q8TCZ2 262 aa23.24■■□□□ 1.31
COMMD1-207ENST00000471704 USP40Q9NVE5 1235 aa23.24■■□□□ 1.31
COMMD1-207ENST00000471704 GAKO14976 1311 aa23.24■■□□□ 1.31
COMMD1-207ENST00000471704 MAST2Q6P0Q8 1798 aa23.24■■□□□ 1.31
COMMD1-207ENST00000471704 IRF6O14896 467 aa23.23■■□□□ 1.31
COMMD1-207ENST00000471704 PPIL2Q13356 520 aa23.23■■□□□ 1.31
COMMD1-207ENST00000471704 CEP85Q6P2H3 762 aa23.23■■□□□ 1.31
COMMD1-207ENST00000471704 HMG20BQ9P0W2 317 aa23.23■■□□□ 1.31
COMMD1-207ENST00000471704 CETPP11597 493 aa23.22■■□□□ 1.31
COMMD1-207ENST00000471704 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
COMMD1-207ENST00000471704 INPP5BP32019 993 aa23.22■■□□□ 1.31
COMMD1-207ENST00000471704 TAF1CQ15572 869 aaPredicted RBP23.22■■□□□ 1.31
COMMD1-207ENST00000471704 ZFPM1Q8IX07 1006 aa23.22■■□□□ 1.31
COMMD1-207ENST00000471704 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
COMMD1-207ENST00000471704 FAM163AQ96GL9 167 aaPredicted RBP23.22■■□□□ 1.31
COMMD1-207ENST00000471704 ZFYVE28Q9HCC9 887 aa23.22■■□□□ 1.31
COMMD1-207ENST00000471704 ZCCHC17Q9NP64 241 aaKnown RBP23.22■■□□□ 1.31
COMMD1-207ENST00000471704 PTPN22Q9Y2R2 807 aa23.22■■□□□ 1.31
COMMD1-207ENST00000471704 NOP58Q9Y2X3 529 aaKnown RBP23.22■■□□□ 1.31
COMMD1-207ENST00000471704 PPATQ06203 517 aa23.21■■□□□ 1.31
COMMD1-207ENST00000471704 SNAPC2Q13487 334 aa23.21■■□□□ 1.31
COMMD1-207ENST00000471704 IDI2Q9BXS1 227 aa23.21■■□□□ 1.31
COMMD1-207ENST00000471704 EFCC1Q9HA90 598 aa23.21■■□□□ 1.31
COMMD1-207ENST00000471704 RFX7Q2KHR2 1363 aa23.21■■□□□ 1.31
COMMD1-207ENST00000471704 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
COMMD1-207ENST00000471704 MCAMP43121 646 aa23.2■■□□□ 1.3
COMMD1-207ENST00000471704 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
COMMD1-207ENST00000471704 GPR108Q9NPR9 543 aa23.2■■□□□ 1.3
COMMD1-207ENST00000471704 ABCF2Q9UG63 623 aa23.2■■□□□ 1.3
COMMD1-207ENST00000471704 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
COMMD1-207ENST00000471704 CDK5RAP2Q96SN8 1893 aa23.19■■□□□ 1.3
COMMD1-207ENST00000471704 ATRNL1Q5VV63 1379 aa23.19■■□□□ 1.3
COMMD1-207ENST00000471704 KIAA0100Q14667 2235 aaKnown RBP23.19■■□□□ 1.3
COMMD1-207ENST00000471704 BTBD19C9JJ37 291 aa23.19■■□□□ 1.3
COMMD1-207ENST00000471704 ENTPD3O75355 529 aa23.19■■□□□ 1.3
COMMD1-207ENST00000471704 SPATA5Q8NB90 893 aa23.19■■□□□ 1.3
COMMD1-207ENST00000471704 RCAN3Q9UKA8 241 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms