RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ACSS3Q9H6R3 686 aa6.72□□□□□ -1.33
PRPF40A-207ENST00000471701 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
PRPF40A-207ENST00000471701 SYNGAP1Q96PV0 1343 aa6.72□□□□□ -1.33
PRPF40A-207ENST00000471701 FAM170BA6NMN3 283 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 XRCC5P13010 732 aaKnown RBP6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 LIG1P18858 919 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 FCGRTP55899 365 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 WDR18Q9BV38 432 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 LGR6Q9HBX8 967 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 TMEM39AQ9NV64 488 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 GPN3Q9UHW5 284 aaPredicted RBP6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 DCTN4Q9UJW0 460 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 DAGLAQ9Y4D2 1042 aa6.71□□□□□ -1.34
PRPF40A-207ENST00000471701 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 BRD1O95696 1058 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 IGHA2P01877 340 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 TMC7Q7Z402 723 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 TP53INP2Q8IXH6 220 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 GLIS3Q8NEA6 775 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 FBXL18Q96ME1 805 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 GSX1Q9H4S2 264 aaPredicted RBP6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 PIDD1Q9HB75 910 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 BSDC1Q9NW68 430 aaPredicted RBP6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 CCDC39Q9UFE4 941 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
PRPF40A-207ENST00000471701 MAPK1P28482 360 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 FAAP100Q0VG06 881 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 MSMPQ1L6U9 139 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 OGFOD3Q6PK18 319 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 KCNB2Q92953 911 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 BCO2Q9BYV7 579 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 ATXN3LQ9H3M9 355 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 GNEQ9Y223 722 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 AKAP2Q9Y2D5 859 aa6.69□□□□□ -1.34
PRPF40A-207ENST00000471701 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 RNGTTO60942 597 aaKnown RBP6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 GSTP1P09211 210 aaKnown RBP6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 ID3Q02535 119 aa6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 VSIG10LQ86VR7 867 aa6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 GATA6Q92908 595 aa6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 WDR89Q96FK6 387 aaPredicted RBP6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 KRT82Q9NSB4 513 aa6.68□□□□□ -1.34
PRPF40A-207ENST00000471701 PRNPP04156 253 aa6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 ZNF765Q7L2R6 523 aa6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 FANCD2OSQ96PS1 177 aa6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 EMILIN2Q9BXX0 1053 aa6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 SSU72Q9NP77 194 aaKnown RBP6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 C1GALT1Q9NS00 363 aa6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 CRIM1Q9NZV1 1036 aa6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 RNF114Q9Y508 228 aa6.67□□□□□ -1.34
PRPF40A-207ENST00000471701 PNMA6FA0A0J9YX94 578 aa6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 TMPRSS2O15393 492 aa6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 ZNF862O60290 1169 aa6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 NXPE4Q6UWF7 544 aa6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 PI16Q6UXB8 463 aa6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 SEZ6L2Q6UXD5 910 aa6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 ZSCAN29Q8IWY8 852 aaPredicted RBP6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 SMYD4Q8IYR2 804 aaPredicted RBP6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 ZC3H7BQ9UGR2 993 aaKnown RBP6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 ADGRE2Q9UHX3 823 aa6.66□□□□□ -1.34
PRPF40A-207ENST00000471701 DYNC1LI2O43237 492 aaPredicted RBP6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 ARNTP27540 789 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 DSC3Q14574 896 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 KIF4BQ2VIQ3 1234 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 ABI1Q8IZP0 508 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 AGBL5Q8NDL9 886 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 FLCNQ8NFG4 579 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 GOLGA2P5Q9HBQ8 144 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 PCOLCE2Q9UKZ9 415 aa6.65□□□□□ -1.34
PRPF40A-207ENST00000471701 TREHO43280 583 aa6.64□□□□□ -1.35
PRPF40A-207ENST00000471701 SULF2Q8IWU5 870 aa6.64□□□□□ -1.35
PRPF40A-207ENST00000471701 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
PRPF40A-207ENST00000471701 CBX8Q9HC52 389 aa6.64□□□□□ -1.35
PRPF40A-207ENST00000471701 DISC1Q9NRI5 854 aa6.64□□□□□ -1.35
PRPF40A-207ENST00000471701 SAMM50Q9Y512 469 aa6.64□□□□□ -1.35
PRPF40A-207ENST00000471701 NME2P22392 152 aa6.63□□□□□ -1.35
PRPF40A-207ENST00000471701 MAPK8P45983 427 aa6.63□□□□□ -1.35
PRPF40A-207ENST00000471701 TTLL4Q14679 1199 aa6.63□□□□□ -1.35
PRPF40A-207ENST00000471701 ENOX2Q16206 610 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-207ENST00000471701 MAP1SQ66K74 1059 aaPredicted RBP6.63□□□□□ -1.35
PRPF40A-207ENST00000471701 ARHGAP27Q6ZUM4 889 aa6.63□□□□□ -1.35
PRPF40A-207ENST00000471701 SLC5A6Q9Y289 635 aa6.63□□□□□ -1.35
PRPF40A-207ENST00000471701 FAM87AP0C7U9 286 aa6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 HCLS1P14317 486 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 GSTT1P30711 240 aa6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 CDK5R2Q13319 367 aa6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 STK11IPQ8N1F8 1099 aa6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 ACSBG1Q96GR2 724 aa6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 CEP44Q9C0F1 390 aa6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 SRCIN1Q9C0H9 1055 aa6.62□□□□□ -1.35
PRPF40A-207ENST00000471701 GIPC1O14908 333 aa6.61□□□□□ -1.35
PRPF40A-207ENST00000471701 ALG1LQ6GMV1 187 aa6.61□□□□□ -1.35
PRPF40A-207ENST00000471701 PDZD3Q86UT5 571 aa6.61□□□□□ -1.35
PRPF40A-207ENST00000471701 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRPF40A-207ENST00000471701 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms