RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 CABS1Q96KC9 395 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 MRFAP1Q9Y605 127 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 FANCGO15287 622 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 FBLN1P23142 703 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 PDE1AP54750 535 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 MARCH10Q8NA82 808 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 CEMIPQ8WUJ3 1361 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 TRIM6Q9C030 488 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 ETAA1Q9NY74 926 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 TNRC6CQ9HCJ0 1690 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 CHUKO15111 745 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 NEBLO76041 1014 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 PPP2R3AQ06190 1150 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 WLSQ5T9L3 541 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 ARMCX5Q6P1M9 558 aa12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 CTCFLQ8NI51 663 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-203ENST00000471660 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 MPHOSPH10O00566 681 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 SHOX2O60902 331 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 RTN2O75298 545 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 SFPQP23246 707 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 CHMLP26374 656 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 TBC1D8BQ0IIM8 1120 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 DHX40Q8IX18 779 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 BICC1Q9H694 974 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 L1RE1Q9UN81 338 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 HMMRO75330 724 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 ERLIN1O75477 346 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 GJB2P29033 226 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 LIG3P49916 1009 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 AMOTL1Q8IY63 956 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 TEX13AQ9BXU3 409 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 ACBD3Q9H3P7 528 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 ANO2Q9NQ90 1003 aa12.35□□□□□ -0.43
CHMP2B-203ENST00000471660 NF2P35240 595 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 HSP90B2PQ58FF3 399 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 FBXW10Q5XX13 1052 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 C11orf57Q6ZUT1 292 aaPredicted RBP12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 RUFY3Q7L099 469 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 MSANTD4Q8NCY6 345 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 N4BP2L2Q92802 583 aaPredicted RBP12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 SH3GL3Q99963 347 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 EPC1Q9H2F5 836 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 TSPYL4Q9UJ04 414 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 BICD2Q8TD16 824 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 ZKSCAN4Q969J2 545 aaPredicted RBP12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 FAM169AQ9Y6X4 670 aa12.34□□□□□ -0.43
CHMP2B-203ENST00000471660 PAX7P23759 505 aa12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 AK2P54819 239 aa12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 AP1ARQ63HQ0 302 aa12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 TTC19Q6DKK2 380 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 SH2B1Q9NRF2 756 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 GOLGA6L4A6NEF3 574 aa12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 GOLGA6L9A6NEM1 432 aa12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 BECN2A8MW95 431 aa12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 ZNF483Q8TF39 744 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-203ENST00000471660 PKD1L3Q7Z443 1732 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 N4BP1O75113 896 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 NR1I2O75469 434 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 FSBPO95073 299 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 TUBBP07437 444 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 HTRA3P83110 453 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 GNL2Q13823 731 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 AKAP4Q5JQC9 854 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 VIPAS39Q9H9C1 493 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 COL18A1P39060 1754 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 EBAG9O00559 213 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 ZSCAN12O43309 604 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 FNTAP49354 379 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 MCM6Q14566 821 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 SYTL4Q96C24 671 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 THUMPD2Q9BTF0 503 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 GBP3Q9H0R5 595 aa12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 NUCKS1Q9H1E3 243 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-203ENST00000471660 INPP5BP32019 993 aa12.31□□□□□ -0.44
CHMP2B-203ENST00000471660 RGS19P49795 217 aa12.31□□□□□ -0.44
CHMP2B-203ENST00000471660 RWDD2BP57060 319 aa12.31□□□□□ -0.44
CHMP2B-203ENST00000471660 MLLT1Q03111 559 aaPredicted RBP12.31□□□□□ -0.44
CHMP2B-203ENST00000471660 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms