RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SUPT20HL1Q3ZLR7 823 aa18.61■□□□□ 0.57
SDC3-203ENST00000471567 ANKRD45Q5TZF3 282 aa18.61■□□□□ 0.57
SDC3-203ENST00000471567 PRAMEF18Q5VWM3 479 aa18.61■□□□□ 0.57
SDC3-203ENST00000471567 NAA16Q6N069 864 aaPredicted RBP18.61■□□□□ 0.57
SDC3-203ENST00000471567 KLRG1Q96E93 195 aa18.61■□□□□ 0.57
SDC3-203ENST00000471567 USP40Q9NVE5 1235 aa18.61■□□□□ 0.57
SDC3-203ENST00000471567 CNTNAP1P78357 1384 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 IGHDP01880 384 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 BTDP43251 543 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 MAP3K12Q12852 859 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 HAUS7Q99871 368 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 BOLA2Q9H3K6 86 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 NDUFB9Q9Y6M9 179 aa18.6■□□□□ 0.57
SDC3-203ENST00000471567 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
SDC3-203ENST00000471567 CACNB3P54284 484 aa18.59■□□□□ 0.57
SDC3-203ENST00000471567 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
SDC3-203ENST00000471567 IDI2Q9BXS1 227 aa18.59■□□□□ 0.57
SDC3-203ENST00000471567 TTC41PQ6P2S7 1318 aa18.58■□□□□ 0.57
SDC3-203ENST00000471567 GOLIM4O00461 696 aa18.58■□□□□ 0.56
SDC3-203ENST00000471567 BAG3O95817 575 aa18.58■□□□□ 0.56
SDC3-203ENST00000471567 HUNKP57058 714 aa18.58■□□□□ 0.56
SDC3-203ENST00000471567 FAM151AQ8WW52 585 aa18.58■□□□□ 0.56
SDC3-203ENST00000471567 TEPSINQ96N21 525 aa18.58■□□□□ 0.56
SDC3-203ENST00000471567 NOL10Q9BSC4 688 aaKnown RBP18.58■□□□□ 0.56
SDC3-203ENST00000471567 PAG1Q9NWQ8 432 aa18.58■□□□□ 0.56
SDC3-203ENST00000471567 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
SDC3-203ENST00000471567 RHBDL3P58872 404 aa18.57■□□□□ 0.56
SDC3-203ENST00000471567 PPP4CP60510 307 aa18.57■□□□□ 0.56
SDC3-203ENST00000471567 NBPF12Q5TAG4 269 aaPredicted RBP18.57■□□□□ 0.56
SDC3-203ENST00000471567 ARMC9Q7Z3E5 817 aa18.57■□□□□ 0.56
SDC3-203ENST00000471567 TMEM39BQ9GZU3 492 aa18.57■□□□□ 0.56
SDC3-203ENST00000471567 MAST2Q6P0Q8 1798 aa18.57■□□□□ 0.56
SDC3-203ENST00000471567 PAPPA2Q9BXP8 1791 aa18.57■□□□□ 0.56
SDC3-203ENST00000471567 RPAP1Q9BWH6 1393 aaPredicted RBP18.56■□□□□ 0.56
SDC3-203ENST00000471567 ERC2O15083 957 aa18.56■□□□□ 0.56
SDC3-203ENST00000471567 PPP1R12BO60237 982 aaPredicted RBP18.56■□□□□ 0.56
SDC3-203ENST00000471567 ENTPD3O75355 529 aa18.56■□□□□ 0.56
SDC3-203ENST00000471567 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
SDC3-203ENST00000471567 PLCG2P16885 1265 aa18.56■□□□□ 0.56
SDC3-203ENST00000471567 CYP7A1P22680 504 aa18.56■□□□□ 0.56
SDC3-203ENST00000471567 ECE1P42892 770 aa18.56■□□□□ 0.56
SDC3-203ENST00000471567 CERS3Q8IU89 383 aa18.56■□□□□ 0.56
SDC3-203ENST00000471567 HOOK2Q96ED9 719 aa18.56■□□□□ 0.56
SDC3-203ENST00000471567 MX1P20591 662 aa18.55■□□□□ 0.56
SDC3-203ENST00000471567 NFIAQ12857 509 aa18.55■□□□□ 0.56
SDC3-203ENST00000471567 TTLL12Q14166 644 aaPredicted RBP18.55■□□□□ 0.56
SDC3-203ENST00000471567 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
SDC3-203ENST00000471567 MAGEB6Q8N7X4 407 aa18.55■□□□□ 0.56
SDC3-203ENST00000471567 FAM198AQ9UFP1 575 aa18.55■□□□□ 0.56
SDC3-203ENST00000471567 DOCK2Q92608 1830 aa18.55■□□□□ 0.56
SDC3-203ENST00000471567 RFX7Q2KHR2 1363 aa18.55■□□□□ 0.56
SDC3-203ENST00000471567 MYO5AQ9Y4I1 1855 aaKnown RBP18.54■□□□□ 0.56
SDC3-203ENST00000471567 SALL3Q9BXA9 1300 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 UNCXA6NJT0 531 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 WDHD1O75717 1129 aaPredicted RBP18.54■□□□□ 0.56
SDC3-203ENST00000471567 GLRX3O76003 335 aaKnown RBP18.54■□□□□ 0.56
SDC3-203ENST00000471567 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
SDC3-203ENST00000471567 VEGFBP49765 207 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 RGS3P49796 1198 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 NUCB1Q02818 461 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 SLC9C2Q5TAH2 1124 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 RGMBQ6NW40 437 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 ADGRA1Q86SQ6 560 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 JMYQ8N9B5 988 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 OTUD7AQ8TE49 926 aaPredicted RBP18.54■□□□□ 0.56
SDC3-203ENST00000471567 EDC3Q96F86 508 aaKnown RBP18.54■□□□□ 0.56
SDC3-203ENST00000471567 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.54■□□□□ 0.56
SDC3-203ENST00000471567 AATFQ9NY61 560 aaKnown RBP eCLIP18.54■□□□□ 0.567e-7■■■■■ 63.9
SDC3-203ENST00000471567 STAP2Q9UGK3 403 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 SSC5DA1L4H1 1573 aa18.54■□□□□ 0.56
SDC3-203ENST00000471567 WDR33Q9C0J8 1336 aaKnown RBP18.53■□□□□ 0.56
SDC3-203ENST00000471567 UBE2Q2LH0YL09 131 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 PDE6AP16499 860 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 TCP10Q12799 353 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 PAXIP1Q6ZW49 1069 aaPredicted RBP18.53■□□□□ 0.56
SDC3-203ENST00000471567 MOB2Q70IA6 237 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 CHD1LQ86WJ1 897 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 PI4K2BQ8TCG2 481 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 CCDC102AQ96A19 550 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 CAPNS2Q96L46 248 aa18.53■□□□□ 0.56
SDC3-203ENST00000471567 ANGEL1Q9UNK9 670 aaKnown RBP18.53■□□□□ 0.56
SDC3-203ENST00000471567 USP2O75604 605 aaPredicted RBP18.52■□□□□ 0.56
SDC3-203ENST00000471567 IREB2P48200 963 aaKnown RBP18.52■□□□□ 0.56
SDC3-203ENST00000471567 PRKG1Q13976 671 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 LDLRAD1Q5T700 205 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 ZSCAN25Q6NSZ9 544 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 CDAN1Q8IWY9 1227 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 TEX11Q8IYF3 940 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 LNPKQ9C0E8 428 aa18.52■□□□□ 0.56
SDC3-203ENST00000471567 ZNF157P51786 506 aaPredicted RBP18.51■□□□□ 0.55
SDC3-203ENST00000471567 PDE1AP54750 535 aa18.51■□□□□ 0.55
SDC3-203ENST00000471567 DCAF15Q66K64 600 aa18.51■□□□□ 0.55
SDC3-203ENST00000471567 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
SDC3-203ENST00000471567 DDX4Q9NQI0 724 aaKnown RBP18.51■□□□□ 0.55
SDC3-203ENST00000471567 CEP350Q5VT06 3117 aa18.51■□□□□ 0.55
SDC3-203ENST00000471567 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 474.5 ms