RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CTDNEP1O95476 244 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 YBX3P16989 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
SPEN-204ENST00000471538 ATP6V1AP38606 617 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 PARP10Q53GL7 1025 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 GORABQ5T7V8 394 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 TTLL5Q6EMB2 1281 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 NSUN7Q8NE18 718 aaKnown RBP7.59□□□□□ -1.19
SPEN-204ENST00000471538 BRF1Q92994 677 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 SYAP1Q96A49 352 aaPredicted RBP7.59□□□□□ -1.19
SPEN-204ENST00000471538 MFRPQ9BY79 579 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 PUS7LQ9H0K6 701 aaKnown RBP7.59□□□□□ -1.19
SPEN-204ENST00000471538 CNNM1Q9NRU3 951 aa7.59□□□□□ -1.19
SPEN-204ENST00000471538 TIAM2Q8IVF5 1701 aa7.59□□□□□ -1.2
SPEN-204ENST00000471538 ELP1O95163 1332 aa7.59□□□□□ -1.2
SPEN-204ENST00000471538 LY75O60449 1722 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 C4AP0C0L4 1744 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 C4BP0C0L5 1744 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 TCRBV5S4A2TA0A5A2 114 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 RGL2O15211 777 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 FIBPO43427 364 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 FGAP02671 866 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 PHKA1P46020 1223 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 RESTQ13127 1097 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 STK3Q13188 491 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 UBE3CQ15386 1083 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 PUM3Q15397 648 aaKnown RBP7.58□□□□□ -1.2
SPEN-204ENST00000471538 CSPP1Q1MSJ5 1256 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 CCDC183Q5T5S1 534 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 ADGRD1Q6QNK2 874 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 TTC6Q86TZ1 520 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 MB21D2Q8IYB1 491 aaPredicted RBP7.58□□□□□ -1.2
SPEN-204ENST00000471538 LPIN2Q92539 896 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 SMARCC1Q92922 1105 aaPredicted RBP7.58□□□□□ -1.2
SPEN-204ENST00000471538 ZNF274Q96GC6 653 aaPredicted RBP7.58□□□□□ -1.2
SPEN-204ENST00000471538 FUCA2Q9BTY2 467 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 UTP14AQ9BVJ6 771 aaKnown RBP7.58□□□□□ -1.2
SPEN-204ENST00000471538 LRRC2Q9BYS8 371 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 PIH1D3Q9NQM4 214 aaKnown RBP7.58□□□□□ -1.2
SPEN-204ENST00000471538 CTNNA3Q9UI47 895 aa7.58□□□□□ -1.2
SPEN-204ENST00000471538 GPAA1O43292 621 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 HRO43593 1189 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 PHF14O94880 888 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 SLC34A2O95436 690 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 UQCRFS1P1P0C7P4 283 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 HCLS1P14317 486 aaPredicted RBP7.57□□□□□ -1.2
SPEN-204ENST00000471538 KRT85P78386 507 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 APOBRQ0VD83 1088 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 TTF1Q15361 905 aaPredicted RBP7.57□□□□□ -1.2
SPEN-204ENST00000471538 NBPF3Q9H094 633 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 TSPY26PQ9H489 355 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 SEC31BQ9NQW1 1179 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 TAOK2Q9UL54 1235 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 ZMYM6O95789 1325 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 PNPLA7Q6ZV29 1317 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 WDR19Q8NEZ3 1342 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 PCNTO95613 3336 aa7.57□□□□□ -1.2
SPEN-204ENST00000471538 PTPDC1A2A3K4 754 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 LETM1O95202 739 aaPredicted RBP7.56□□□□□ -1.2
SPEN-204ENST00000471538 HSP90B1P14625 803 aaKnown RBP7.56□□□□□ -1.2
SPEN-204ENST00000471538 PDE6AP16499 860 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 PDIA3P30101 505 aaKnown RBP7.56□□□□□ -1.2
SPEN-204ENST00000471538 CLCN1P35523 988 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 ADD1P35611 737 aaKnown RBP7.56□□□□□ -1.2
SPEN-204ENST00000471538 ANTXR2P58335 489 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 IMMTQ16891 758 aaKnown RBP7.56□□□□□ -1.2
SPEN-204ENST00000471538 WASHC4Q2M389 1173 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 NAA16Q6N069 864 aaPredicted RBP7.56□□□□□ -1.2
SPEN-204ENST00000471538 ZSCAN25Q6NSZ9 544 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 FAM173BQ6P4H8 233 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 CLEC4GQ6UXB4 293 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 LINC00116Q8NCU8 138 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.29e-8■■■□□ 18
SPEN-204ENST00000471538 WWC3Q9ULE0 1092 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
SPEN-204ENST00000471538 ESPNB1AK53 854 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 SLC5A1P13866 664 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 KCNQ4P56696 695 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 HMGN5P82970 282 aaKnown RBP7.55□□□□□ -1.2
SPEN-204ENST00000471538 RASGRF1Q13972 1273 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 ALX1Q15699 326 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 CCDC152Q4G0S7 254 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 SLC9C2Q5TAH2 1124 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 FERMT3Q86UX7 667 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 SPATA5Q8NB90 893 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 NKX2-3Q8TAU0 364 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 LEO1Q8WVC0 666 aaPredicted RBP7.55□□□□□ -1.2
SPEN-204ENST00000471538 ZSCAN16Q9H4T2 348 aaPredicted RBP7.55□□□□□ -1.2
SPEN-204ENST00000471538 GPHNQ9NQX3 736 aaPredicted RBP7.55□□□□□ -1.2
SPEN-204ENST00000471538 HPS5Q9UPZ3 1129 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 NIP7Q9Y221 180 aaKnown RBP eCLIP7.55□□□□□ -1.2
SPEN-204ENST00000471538 ZNF532Q9HCE3 1301 aa7.55□□□□□ -1.2
SPEN-204ENST00000471538 SNAP23O00161 211 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 STK25O00506 426 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 ARHGAP33O14559 1287 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 PRC1O43663 620 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 FDPSP14324 419 aaKnown RBP7.54□□□□□ -1.2
SPEN-204ENST00000471538 HSPA6P17066 643 aa7.54□□□□□ -1.2
SPEN-204ENST00000471538 HAND2P61296 217 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms