RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 HOOK2Q96ED9 719 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 PARK7Q99497 189 aaKnown RBP8.73□□□□□ -1.01
HDAC1-204ENST00000471488 COL25A1Q9BXS0 654 aaPredicted RBP8.73□□□□□ -1.01
HDAC1-204ENST00000471488 ZNF341Q9BYN7 854 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 PRO3102Q9H379 93 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 SPINK5Q9NQ38 1064 aaPredicted RBP8.73□□□□□ -1.01
HDAC1-204ENST00000471488 RANBP2P49792 3224 aaKnown RBP8.73□□□□□ -1.01
HDAC1-204ENST00000471488 MYBBP1AQ9BQG0 1328 aaKnown RBP8.73□□□□□ -1.01
HDAC1-204ENST00000471488 ZNF853P0CG23 659 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 FLT3LGP49771 235 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 BCAMP50895 628 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 PPATQ06203 517 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 C15orf52Q6ZUT6 534 aaKnown RBP8.72□□□□□ -1.01
HDAC1-204ENST00000471488 NECAB2Q7Z6G3 386 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 SMCR8Q8TEV9 937 aaPredicted RBP8.72□□□□□ -1.01
HDAC1-204ENST00000471488 DNAAF4Q8WXU2 420 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 PLA2G12BQ9BX93 195 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 UBE2OQ9C0C9 1292 aaKnown RBP8.72□□□□□ -1.01
HDAC1-204ENST00000471488 ZCCHC17Q9NP64 241 aaKnown RBP8.72□□□□□ -1.01
HDAC1-204ENST00000471488 FAM205AQ6ZU69 1335 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 IRS2Q9Y4H2 1338 aa8.72□□□□□ -1.01
HDAC1-204ENST00000471488 FLIIQ13045 1269 aa8.71□□□□□ -1.02
HDAC1-204ENST00000471488 TWISTNBQ3B726 338 aaPredicted RBP8.71□□□□□ -1.02
HDAC1-204ENST00000471488 UBE2Q1Q7Z7E8 422 aa8.71□□□□□ -1.02
HDAC1-204ENST00000471488 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.71□□□□□ -1.02
HDAC1-204ENST00000471488 TDRD7Q8NHU6 1098 aaKnown RBP8.71□□□□□ -1.02
HDAC1-204ENST00000471488 STXBP5LQ9Y2K9 1186 aa8.71□□□□□ -1.02
HDAC1-204ENST00000471488 ARAP2Q8WZ64 1704 aa8.71□□□□□ -1.02
HDAC1-204ENST00000471488 AK9Q5TCS8 1911 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 F6X3S4 739 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 MAGEA10P43363 369 aaPredicted RBP8.7□□□□□ -1.02
HDAC1-204ENST00000471488 CASP7P55210 303 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 FOXO4P98177 505 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 DDX10Q13206 875 aaKnown RBP8.7□□□□□ -1.02
HDAC1-204ENST00000471488 CAVIN4Q5BKX8 364 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 LINS1Q8NG48 757 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 COA7Q96BR5 231 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 FAM84BQ96KN1 310 aaPredicted RBP8.7□□□□□ -1.02
HDAC1-204ENST00000471488 PUS3Q9BZE2 481 aaKnown RBP8.7□□□□□ -1.02
HDAC1-204ENST00000471488 PICK1Q9NRD5 415 aa8.7□□□□□ -1.02
HDAC1-204ENST00000471488 C9orf78Q9NZ63 289 aaPredicted RBP8.7□□□□□ -1.02
HDAC1-204ENST00000471488 UBE4AQ14139 1066 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 METTL24Q5JXM2 366 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 EPHA10Q5JZY3 1008 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 SLC4A10Q6U841 1118 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 ZSCAN29Q8IWY8 852 aaPredicted RBP8.69□□□□□ -1.02
HDAC1-204ENST00000471488 TDHQ8IZJ6 230 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 ANKRD13CQ8N6S4 541 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 TBC1D22AQ8WUA7 517 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.69□□□□□ -1.02
HDAC1-204ENST00000471488 MTMR10Q9NXD2 777 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 ZHX2Q9Y6X8 837 aa8.69□□□□□ -1.02
HDAC1-204ENST00000471488 TRIM75PA6NK02 468 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 BCRP11274 1271 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 MDM2Q00987 491 aaPredicted RBP8.68□□□□□ -1.02
HDAC1-204ENST00000471488 FAM83AQ86UY5 434 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 GDF15Q99988 308 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 NBPF3Q9H094 633 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 C11orf49Q9H6J7 331 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 SALL2Q9Y467 1007 aaPredicted RBP8.68□□□□□ -1.02
HDAC1-204ENST00000471488 ADGRA2Q96PE1 1338 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
HDAC1-204ENST00000471488 MAST3O60307 1309 aa8.67□□□□□ -1.02
HDAC1-204ENST00000471488 APOBEC3HQ6NTF7 200 aaKnown RBP8.67□□□□□ -1.02
HDAC1-204ENST00000471488 GPAT2Q6NUI2 795 aa8.67□□□□□ -1.02
HDAC1-204ENST00000471488 FASTKD5Q7L8L6 764 aaKnown RBP8.67□□□□□ -1.02
HDAC1-204ENST00000471488 CCDC84Q86UT8 332 aaPredicted RBP8.67□□□□□ -1.02
HDAC1-204ENST00000471488 FAM151AQ8WW52 585 aa8.67□□□□□ -1.02
HDAC1-204ENST00000471488 ZDHHC15Q96MV8 337 aa8.67□□□□□ -1.02
HDAC1-204ENST00000471488 USP40Q9NVE5 1235 aa8.67□□□□□ -1.02
HDAC1-204ENST00000471488 KCNH4Q9UQ05 1017 aa8.67□□□□□ -1.02
HDAC1-204ENST00000471488 LRRFIP2Q9Y608 721 aaKnown RBP8.67□□□□□ -1.02
HDAC1-204ENST00000471488 RPTORQ8N122 1335 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 GRM8O00222 908 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 BMP8BP34820 402 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 HDLBPQ00341 1268 aaKnown RBP8.66□□□□□ -1.02
HDAC1-204ENST00000471488 NFIAQ12857 509 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 TRIM32Q13049 653 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 MOGSQ13724 837 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 LRIT3Q3SXY7 679 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 GPR153Q6NV75 609 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 PXYLP1Q8TE99 480 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
HDAC1-204ENST00000471488 PAK6Q9NQU5 681 aaPredicted RBP8.66□□□□□ -1.02
HDAC1-204ENST00000471488 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.66□□□□□ -1.02
HDAC1-204ENST00000471488 CUL9Q8IWT3 2517 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 LAMA3Q16787 3333 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 MGAMO43451 1857 aa8.66□□□□□ -1.02
HDAC1-204ENST00000471488 MROH5Q6ZUA9 1318 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 CXCL11O14625 94 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 HMGCRP04035 888 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 PICALMQ13492 652 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 LRRC24Q50LG9 513 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
HDAC1-204ENST00000471488 CDC42EP5Q6NZY7 148 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 FBXO33Q7Z6M2 555 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 SCYL3Q8IZE3 742 aa8.65□□□□□ -1.02
HDAC1-204ENST00000471488 LBHD1Q9BQE6 289 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms