RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TNNI2P48788 182 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 PPFIA1Q13136 1202 aa7.7□□□□□ -1.18
BRCA1-210ENST00000471181 FHOD3Q2V2M9 1422 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 IFT140Q96RY7 1462 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 FOXD4Q12950 439 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-210ENST00000471181 NDUFAB1O14561 156 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 SESN3P58005 492 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 SLC9A5Q14940 896 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 NOLC1Q14978 699 aaKnown RBP eCLIP7.69□□□□□ -1.18
BRCA1-210ENST00000471181 UVSSAQ2YD98 709 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 ZSCAN23Q3MJ62 389 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 SYT10Q6XYQ8 523 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 ACRBPQ8NEB7 543 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 PARD3BQ8TEW8 1205 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 SCYL1Q96KG9 808 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 SPATA17Q96L03 361 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 HAUS2Q9NVX0 235 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 SCAPERQ9BY12 1400 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 ADAMTS2O95450 1211 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 PDE6AP16499 860 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 MUM1L1Q5H9M0 696 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 KRT79Q5XKE5 535 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 PFDN1O60925 122 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 MCM5P33992 734 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 GCKP35557 465 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 ITKQ08881 620 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 VPS37BQ9H9H4 285 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 EFCC1Q9HA90 598 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 SLC4A4Q9Y6R1 1079 aa7.69□□□□□ -1.18
BRCA1-210ENST00000471181 OATP04181 439 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 GSTA1P08263 222 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 GSTA2P09210 222 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 KRT15P19012 456 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 UBE2HP62256 183 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 RTN1Q16799 776 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 DUSP27Q5VZP5 1158 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 DCLK2Q8N568 766 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 DNAJC25Q9H1X3 360 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 ZBTB3Q9H5J0 574 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 ASIC3Q9UHC3 531 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 BCAP29Q9UHQ4 241 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 GINS2Q9Y248 185 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 BRD4O60885 1362 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 CCDC169A6NNP5 214 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 SOGA1O94964 1423 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 TBC1D8O95759 1140 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 ANKRD42Q8N9B4 389 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 RIOK1Q9BRS2 568 aaKnown RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 LRRC2Q9BYS8 371 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 CABP1Q9NZU7 370 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 ZBBXA8MT70 800 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 DNAJC8O75937 253 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 FAM200AQ8TCP9 573 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 EVI5LQ96CN4 794 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 SPC25Q9HBM1 224 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 SLC4A1P02730 911 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 EPB41P11171 864 aaKnown RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 NOP14P78316 857 aaKnown RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 ACBD5Q5T8D3 534 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 NBPF6Q5VWK0 638 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 POTEDQ86YR6 584 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 NECAB1Q8N987 351 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 ABTB1Q969K4 478 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 RRP36Q96EU6 259 aaKnown RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 NBPF4Q96M43 638 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 LRGUKQ96M69 825 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 CDC5LQ99459 802 aaKnown RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 CNPY2Q9Y2B0 182 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 AKNAQ7Z591 1439 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 ACTN4O43707 911 aaKnown RBP7.68□□□□□ -1.18
BRCA1-210ENST00000471181 NBPF8Q3BBV2 869 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 LGSNQ5TDP6 509 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 PPP4R1Q8TF05 950 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 RBSNQ9H1K0 784 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 CTNND2Q9UQB3 1225 aa7.68□□□□□ -1.18
BRCA1-210ENST00000471181 RTL1A6NKG5 1358 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 ZBTB43O43298 467 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 TAF7Q15545 349 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 ANKRD20A3Q5VUR7 823 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 UBL4BQ8N7F7 174 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 TRIM4Q9C037 500 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 NUCKS1Q9H1E3 243 aaKnown RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 BAIAP2L1Q9UHR4 511 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 FRMD3A2A2Y4 597 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 SAT1P21673 171 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 CYP7A1P22680 504 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 TRAF1Q13077 416 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 C8orf74Q6P047 294 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 UBE3BQ7Z3V4 1068 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 FAM71BQ8TC56 605 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 HDAC11Q96DB2 347 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 ZKSCAN3Q9BRR0 538 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 KRT23Q9C075 422 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 ZNF608Q9ULD9 1512 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-210ENST00000471181 BMP15O95972 392 aa7.67□□□□□ -1.18
BRCA1-210ENST00000471181 ABL1P00519 1130 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms