RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 C12orf49Q9H741 205 aa9.29□□□□□ -0.92
PRPF40A-206ENST00000471167 GPN3Q9UHW5 284 aaPredicted RBP9.29□□□□□ -0.92
PRPF40A-206ENST00000471167 DYNC1LI2O43237 492 aaPredicted RBP9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 F13BP05160 661 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 LRP8Q14114 963 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 KIF4BQ2VIQ3 1234 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 SULF2Q8IWU5 870 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 DBNDD2Q9BQY9 259 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 SEMA6CQ9H3T2 930 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 PPP4R2Q9NY27 417 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 SYNGAP1Q96PV0 1343 aa9.28□□□□□ -0.92
PRPF40A-206ENST00000471167 NFICP08651 508 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 ARNTP27540 789 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 GSTT1P30711 240 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 PDE3AQ14432 1141 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 TPTE2Q6XPS3 522 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 DDX54Q8TDD1 881 aaKnown RBP9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 MFSD14AQ96MC6 490 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 SRCIN1Q9C0H9 1055 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 DISC1Q9NRI5 854 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 CRIM1Q9NZV1 1036 aa9.27□□□□□ -0.93
PRPF40A-206ENST00000471167 FAM95CA0A1B0GW59 222 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 ADAMTS4O75173 837 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 USP17L7P0C7H9 530 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 CD97P48960 835 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 COL19A1Q14993 1142 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 DYMQ7RTS9 669 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 FBXO33Q7Z6M2 555 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 DUSP9Q99956 384 aaKnown RBP9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 ZFYVE1Q9HBF4 777 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 ZFP64Q9NPA5 681 aa9.26□□□□□ -0.93
PRPF40A-206ENST00000471167 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 GIPC1O14908 333 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 GSC2O15499 205 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 PRPF40AO75400 957 aaKnown RBP9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 CELA3AP09093 270 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 NME2P22392 152 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 RXRBP28702 533 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 SSTR4P31391 388 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 USP11P51784 963 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 GZF1Q9H116 711 aaPredicted RBP9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 C1GALT1Q9NS00 363 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 RAD18Q9NS91 495 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 KRT82Q9NSB4 513 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 PRKAG2Q9UGJ0 569 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
PRPF40A-206ENST00000471167 WDR64B1ANS9 1081 aa9.24□□□□□ -0.93
PRPF40A-206ENST00000471167 GNA15P30679 374 aa9.24□□□□□ -0.93
PRPF40A-206ENST00000471167 ASPAP45381 313 aa9.24□□□□□ -0.93
PRPF40A-206ENST00000471167 ATP2B2Q01814 1243 aa9.24□□□□□ -0.93
PRPF40A-206ENST00000471167 PPP2R3AQ06190 1150 aa9.24□□□□□ -0.93
PRPF40A-206ENST00000471167 NFKBIBQ15653 356 aa9.24□□□□□ -0.93
PRPF40A-206ENST00000471167 FANCD2OSQ96PS1 177 aa9.24□□□□□ -0.93
PRPF40A-206ENST00000471167 RAB6AP20340 208 aa9.23□□□□□ -0.93
PRPF40A-206ENST00000471167 GPBAR1Q8TDU6 330 aa9.23□□□□□ -0.93
PRPF40A-206ENST00000471167 KCNB2Q92953 911 aa9.23□□□□□ -0.93
PRPF40A-206ENST00000471167 FAM8A1Q9UBU6 413 aa9.23□□□□□ -0.93
PRPF40A-206ENST00000471167 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
PRPF40A-206ENST00000471167 SPG7Q9UQ90 795 aa9.23□□□□□ -0.93
PRPF40A-206ENST00000471167 AK5Q9Y6K8 562 aa9.23□□□□□ -0.93
PRPF40A-206ENST00000471167 PTPN11Q06124 597 aaPredicted RBP9.22□□□□□ -0.93
PRPF40A-206ENST00000471167 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
PRPF40A-206ENST00000471167 ZC3H12AQ5D1E8 599 aaKnown RBP9.22□□□□□ -0.93
PRPF40A-206ENST00000471167 MAP1SQ66K74 1059 aaPredicted RBP9.22□□□□□ -0.93
PRPF40A-206ENST00000471167 FBXL6Q8N531 539 aa9.22□□□□□ -0.93
PRPF40A-206ENST00000471167 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.21□□□□□ -0.94
PRPF40A-206ENST00000471167 KIAA1324LA8MWY0 1029 aaPredicted RBP9.21□□□□□ -0.94
PRPF40A-206ENST00000471167 NEFMP07197 916 aa9.21□□□□□ -0.94
PRPF40A-206ENST00000471167 NTF4P34130 210 aa9.21□□□□□ -0.94
PRPF40A-206ENST00000471167 ID3Q02535 119 aa9.21□□□□□ -0.94
PRPF40A-206ENST00000471167 HP1BP3Q5SSJ5 553 aaPredicted RBP9.21□□□□□ -0.94
PRPF40A-206ENST00000471167 LGR6Q9HBX8 967 aa9.21□□□□□ -0.94
PRPF40A-206ENST00000471167 FAM170BA6NMN3 283 aa9.2□□□□□ -0.94
PRPF40A-206ENST00000471167 CTSHP09668 335 aa9.2□□□□□ -0.94
PRPF40A-206ENST00000471167 PAOXQ6QHF9 649 aa9.2□□□□□ -0.94
PRPF40A-206ENST00000471167 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
PRPF40A-206ENST00000471167 FAM161BQ96MY7 647 aa9.2□□□□□ -0.94
PRPF40A-206ENST00000471167 PARP2Q9UGN5 583 aa9.2□□□□□ -0.94
PRPF40A-206ENST00000471167 SPINK2P20155 84 aa9.19□□□□□ -0.94
PRPF40A-206ENST00000471167 RING1Q06587 406 aa9.19□□□□□ -0.94
PRPF40A-206ENST00000471167 DAB2P98082 770 aa9.18□□□□□ -0.94
PRPF40A-206ENST00000471167 TTLL4Q14679 1199 aa9.18□□□□□ -0.94
PRPF40A-206ENST00000471167 MEI1Q5TIA1 1274 aa9.18□□□□□ -0.94
PRPF40A-206ENST00000471167 UBE3DQ7Z6J8 389 aa9.18□□□□□ -0.94
PRPF40A-206ENST00000471167 FRMD6Q96NE9 622 aa9.18□□□□□ -0.94
PRPF40A-206ENST00000471167 CEP44Q9C0F1 390 aa9.18□□□□□ -0.94
PRPF40A-206ENST00000471167 COBLO75128 1261 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 SLFN14P0C7P3 912 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 EIF4BP23588 611 aaKnown RBP9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 PCNX4Q63HM2 1172 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 NFXL1Q6ZNB6 911 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 TBC1D32Q96NH3 1257 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 CBX8Q9HC52 389 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
PRPF40A-206ENST00000471167 HCLS1P14317 486 aaPredicted RBP9.16□□□□□ -0.94
PRPF40A-206ENST00000471167 CDK8P49336 464 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms