RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 PRMT6Q96LA8 375 aaPredicted RBP34.72■■■■□ 3.15
SOD1-203ENST00000470944 L3MBTL3Q96JM7 780 aaPredicted RBP34.71■■■■□ 3.15
SOD1-203ENST00000470944 RBM26Q5T8P6 1007 aaKnown RBP34.7■■■■□ 3.15
SOD1-203ENST00000470944 PPP4CP60510 307 aa34.69■■■■□ 3.14
SOD1-203ENST00000470944 DLGAP5Q15398 846 aa34.69■■■■□ 3.14
SOD1-203ENST00000470944 STRBPQ96SI9 672 aaKnown RBP34.69■■■■□ 3.14
SOD1-203ENST00000470944 SPDYE2BA6NHP3 402 aa34.69■■■■□ 3.14
SOD1-203ENST00000470944 SPDYE6P0CI01 402 aa34.69■■■■□ 3.14
SOD1-203ENST00000470944 RHBDL3P58872 404 aa34.69■■■■□ 3.14
SOD1-203ENST00000470944 TBC1D10BQ4KMP7 808 aaPredicted RBP34.69■■■■□ 3.14
SOD1-203ENST00000470944 SH3RF3Q8TEJ3 882 aaPredicted RBP34.69■■■■□ 3.14
SOD1-203ENST00000470944 CCDC171Q6TFL3 1326 aa34.69■■■■□ 3.14
SOD1-203ENST00000470944 RAD50Q92878 1312 aa34.69■■■■□ 3.14
SOD1-203ENST00000470944 H7C1D1 291 aa34.68■■■■□ 3.14
SOD1-203ENST00000470944 BAG3O95817 575 aa34.68■■■■□ 3.14
SOD1-203ENST00000470944 ZBED3Q96IU2 234 aaPredicted RBP34.68■■■■□ 3.14
SOD1-203ENST00000470944 SEC24BO95487 1268 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 VPS53Q5VIR6 699 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 MTMR14Q8NCE2 650 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 NOL10Q9BSC4 688 aaKnown RBP34.67■■■■□ 3.14
SOD1-203ENST00000470944 PRKAB2O43741 272 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 MMP14P50281 582 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 NBPF9Q3BBW0 867 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 CDC42EP5Q6NZY7 148 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 TRPM4Q8TD43 1214 aa34.67■■■■□ 3.14
SOD1-203ENST00000470944 WNT10BO00744 389 aa34.66■■■■□ 3.14
SOD1-203ENST00000470944 LMOD1P29536 600 aaPredicted RBP34.66■■■■□ 3.14
SOD1-203ENST00000470944 TDRD3Q9H7E2 651 aaKnown RBP34.66■■■■□ 3.14
SOD1-203ENST00000470944 FOXP2O15409 715 aa34.65■■■■□ 3.14
SOD1-203ENST00000470944 USP40Q9NVE5 1235 aa34.65■■■■□ 3.14
SOD1-203ENST00000470944 POTECB2RU33 542 aa34.64■■■■□ 3.14
SOD1-203ENST00000470944 KIF4BQ2VIQ3 1234 aa34.64■■■■□ 3.14
SOD1-203ENST00000470944 SDR42E1Q8WUS8 393 aa34.63■■■■□ 3.13
SOD1-203ENST00000470944 HIRAP54198 1017 aaPredicted RBP34.62■■■■□ 3.13
SOD1-203ENST00000470944 CACNB3P54284 484 aa34.62■■■■□ 3.13
SOD1-203ENST00000470944 HACL1Q9UJ83 578 aa34.62■■■■□ 3.13
SOD1-203ENST00000470944 SLC4A4Q9Y6R1 1079 aa34.62■■■■□ 3.13
SOD1-203ENST00000470944 ASTN2O75129 1339 aaPredicted RBP34.62■■■■□ 3.13
SOD1-203ENST00000470944 PTH1RQ03431 593 aa34.61■■■■□ 3.13
SOD1-203ENST00000470944 ANO2Q9NQ90 1003 aa34.61■■■■□ 3.13
SOD1-203ENST00000470944 ADARB2Q9NS39 739 aaKnown RBP34.61■■■■□ 3.13
SOD1-203ENST00000470944 CLRN2A0PK11 232 aa34.61■■■■□ 3.13
SOD1-203ENST00000470944 TEX11Q8IYF3 940 aa34.61■■■■□ 3.13
SOD1-203ENST00000470944 BACH2Q9BYV9 841 aa34.61■■■■□ 3.13
SOD1-203ENST00000470944 WDHD1O75717 1129 aaPredicted RBP34.6■■■■□ 3.13
SOD1-203ENST00000470944 HSPD1P10809 573 aaKnown RBP34.6■■■■□ 3.13
SOD1-203ENST00000470944 PLCG2P16885 1265 aa34.6■■■■□ 3.13
SOD1-203ENST00000470944 MFAP1P55081 439 aaKnown RBP34.6■■■■□ 3.13
SOD1-203ENST00000470944 CRNKL1Q9BZJ0 848 aaKnown RBP34.6■■■■□ 3.13
SOD1-203ENST00000470944 LSG1Q9H089 658 aaKnown RBP34.6■■■■□ 3.13
SOD1-203ENST00000470944 WDR90Q96KV7 1748 aa34.6■■■■□ 3.13
SOD1-203ENST00000470944 GSG1L2A8MUP6 293 aa34.59■■■■□ 3.13
SOD1-203ENST00000470944 CERS3Q8IU89 383 aa34.59■■■■□ 3.13
SOD1-203ENST00000470944 NFIAQ12857 509 aa34.58■■■■□ 3.13
SOD1-203ENST00000470944 ZNF526Q8TF50 670 aaPredicted RBP34.58■■■■□ 3.13
SOD1-203ENST00000470944 TGFBRAP1Q8WUH2 860 aa34.58■■■■□ 3.13
SOD1-203ENST00000470944 EPB41L4AQ9HCS5 686 aaPredicted RBP34.58■■■■□ 3.13
SOD1-203ENST00000470944 ZNF70Q9UC06 446 aaPredicted RBP34.58■■■■□ 3.13
SOD1-203ENST00000470944 EPHX2P34913 555 aa34.58■■■■□ 3.13
SOD1-203ENST00000470944 SPDYE2Q495Y8 402 aa34.58■■■■□ 3.13
SOD1-203ENST00000470944 GNAT2P19087 354 aa34.57■■■■□ 3.12
SOD1-203ENST00000470944 DDX4Q9NQI0 724 aaKnown RBP34.57■■■■□ 3.12
SOD1-203ENST00000470944 PATL2C9JE40 543 aaKnown RBP34.56■■■■□ 3.12
SOD1-203ENST00000470944 APPP05067 770 aa34.56■■■■□ 3.12
SOD1-203ENST00000470944 KIAA1211Q6ZU35 1233 aa34.56■■■■□ 3.12
SOD1-203ENST00000470944 TAF1DQ9H5J8 278 aaPredicted RBP34.56■■■■□ 3.12
SOD1-203ENST00000470944 IQCA1LA6NCM1 817 aa34.55■■■■□ 3.12
SOD1-203ENST00000470944 MAPKAPK5Q8IW41 473 aa34.55■■■■□ 3.12
SOD1-203ENST00000470944 PICALMQ13492 652 aa34.55■■■■□ 3.12
SOD1-203ENST00000470944 RRAGCQ9HB90 399 aa34.55■■■■□ 3.12
SOD1-203ENST00000470944 DCP1AQ9NPI6 582 aaPredicted RBP34.55■■■■□ 3.12
SOD1-203ENST00000470944 MKRN1Q9UHC7 482 aaKnown RBP34.55■■■■□ 3.12
SOD1-203ENST00000470944 MYO1BO43795 1136 aa34.54■■■■□ 3.12
SOD1-203ENST00000470944 REC8O95072 547 aa34.54■■■■□ 3.12
SOD1-203ENST00000470944 USP5P45974 858 aa34.54■■■■□ 3.12
SOD1-203ENST00000470944 DSCC1Q9BVC3 393 aa34.54■■■■□ 3.12
SOD1-203ENST00000470944 VEZTQ9HBM0 779 aa34.54■■■■□ 3.12
SOD1-203ENST00000470944 SCAF8Q9UPN6 1271 aaKnown RBP34.54■■■■□ 3.12
SOD1-203ENST00000470944 IFNL3Q8IZI9 196 aa34.53■■■■□ 3.12
SOD1-203ENST00000470944 FAM198AQ9UFP1 575 aa34.53■■■■□ 3.12
SOD1-203ENST00000470944 FLT1P17948 1338 aa34.53■■■■□ 3.12
SOD1-203ENST00000470944 SCN4AP35499 1836 aa34.53■■■■□ 3.12
SOD1-203ENST00000470944 MAP4K1Q92918 833 aa34.52■■■■□ 3.12
SOD1-203ENST00000470944 IDI2Q9BXS1 227 aa34.52■■■■□ 3.12
SOD1-203ENST00000470944 NMRK2Q9NPI5 230 aa34.52■■■■□ 3.12
SOD1-203ENST00000470944 TCP10L2B9ZVM9 353 aa34.52■■■■□ 3.12
SOD1-203ENST00000470944 ZFPM1Q8IX07 1006 aa34.52■■■■□ 3.12
SOD1-203ENST00000470944 CDK5RAP2Q96SN8 1893 aa34.51■■■■□ 3.12
SOD1-203ENST00000470944 FGAP02671 866 aa34.51■■■■□ 3.12
SOD1-203ENST00000470944 TCP10Q12799 353 aa34.51■■■■□ 3.12
SOD1-203ENST00000470944 USP50Q70EL3 339 aaPredicted RBP34.51■■■■□ 3.12
SOD1-203ENST00000470944 ATP8A2Q9NTI2 1148 aa34.51■■■■□ 3.12
SOD1-203ENST00000470944 ECM29Q5VYK3 1845 aa34.51■■■■□ 3.11
SOD1-203ENST00000470944 ANGEL2Q5VTE6 544 aaKnown RBP34.5■■■■□ 3.11
SOD1-203ENST00000470944 TMOD2Q9NZR1 351 aa34.5■■■■□ 3.11
SOD1-203ENST00000470944 USP26Q9BXU7 913 aa34.5■■■■□ 3.11
SOD1-203ENST00000470944 GGA3Q9NZ52 723 aa34.5■■■■□ 3.11
SOD1-203ENST00000470944 RPAP1Q9BWH6 1393 aaPredicted RBP34.49■■■■□ 3.11
SOD1-203ENST00000470944 VEGFAP15692 232 aaPredicted RBP34.49■■■■□ 3.11
SOD1-203ENST00000470944 SAP30BPQ9UHR5 308 aaKnown RBP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms