RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 MECOMQ03112 1051 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 CHAF1AQ13111 956 aaPredicted RBP12.96□□□□□ -0.33
SND1-208ENST00000470463 SART3Q15020 963 aaKnown RBP12.96□□□□□ -0.33
SND1-208ENST00000470463 ME3Q16798 604 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.33
SND1-208ENST00000470463 STOX1Q6ZVD7 989 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 C2CD5Q86YS7 1000 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 TMTC2Q8N394 836 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.33
SND1-208ENST00000470463 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 CCDC88AQ3V6T2 1871 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 LAMA4Q16363 1823 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 FAM205AQ6ZU69 1335 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 BRD1O95696 1058 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 KLRK1P26718 216 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 HMGN5P82970 282 aaKnown RBP12.95□□□□□ -0.34
SND1-208ENST00000470463 AKNAD1Q5T1N1 836 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 TTLL5Q6EMB2 1281 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 MFSD6Q6ZSS7 791 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 TXNRD3Q86VQ6 643 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 CCDC83Q8IWF9 413 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 MB21D2Q8IYB1 491 aaPredicted RBP12.95□□□□□ -0.34
SND1-208ENST00000470463 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 SUPT20HQ8NEM7 779 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 STAG1Q8WVM7 1258 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
SND1-208ENST00000470463 KIAA1551Q9HCM1 1747 aa12.95□□□□□ -0.34
SND1-208ENST00000470463 CACNA1SQ13698 1873 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 MYO5AQ9Y4I1 1855 aaKnown RBP12.94□□□□□ -0.34
SND1-208ENST00000470463 G3V3G9 751 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 PRC1O43663 620 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 PFKFB2O60825 505 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 BRF1Q92994 677 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 ZNF622Q969S3 477 aaKnown RBP eCLIP12.94□□□□□ -0.34
SND1-208ENST00000470463 ARPP21Q9UBL0 812 aaPredicted RBP12.94□□□□□ -0.34
SND1-208ENST00000470463 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 CD2APQ9Y5K6 639 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 TAF6LQ9Y6J9 622 aa12.94□□□□□ -0.34
SND1-208ENST00000470463 WTIPA6NIX2 430 aaPredicted RBP12.93□□□□□ -0.34
SND1-208ENST00000470463 GJB2P29033 226 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 PRDX5P30044 214 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 RCAN1P53805 252 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 PPP4CP60510 307 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 HAND2P61296 217 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 MIGA1Q8NAN2 632 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
SND1-208ENST00000470463 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
SND1-208ENST00000470463 ANGEL1Q9UNK9 670 aaKnown RBP12.93□□□□□ -0.34
SND1-208ENST00000470463 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
SND1-208ENST00000470463 ERICH2A1L162 156 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 STX6O43752 255 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 HSPA6P17066 643 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 LIFRP42702 1097 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 FKBP1AP62942 108 aaKnown RBP12.92□□□□□ -0.34
SND1-208ENST00000470463 PPARAQ07869 468 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 PPP2R5BQ15173 497 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 CSPP1Q1MSJ5 1256 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 SBK1Q52WX2 424 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 SOGA3Q5TF21 947 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 CPLX2Q6PUV4 134 aaKnown RBP12.92□□□□□ -0.34
SND1-208ENST00000470463 ESR2Q92731 530 aa12.92□□□□□ -0.34
SND1-208ENST00000470463 RTFDC1Q9BY42 306 aaPredicted RBP12.92□□□□□ -0.34
SND1-208ENST00000470463 CDKL5O76039 1030 aa12.91□□□□□ -0.34
SND1-208ENST00000470463 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
SND1-208ENST00000470463 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
SND1-208ENST00000470463 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.348e-25■□□□□ 10.2
SND1-208ENST00000470463 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
SND1-208ENST00000470463 SYNE3Q6ZMZ3 975 aa12.91□□□□□ -0.34
SND1-208ENST00000470463 ADGRA1Q86SQ6 560 aa12.91□□□□□ -0.34
SND1-208ENST00000470463 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
SND1-208ENST00000470463 ZNF287Q9HBT7 754 aa12.91□□□□□ -0.34
SND1-208ENST00000470463 MROH7-TTC4A0A0A0MT08 1334 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 C10orf71Q711Q0 1435 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 PRKAB2O43741 272 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 LARGE1O95461 756 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 FGRP09769 529 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 SYT1P21579 422 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
SND1-208ENST00000470463 PDE4BQ07343 736 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 LARP1BQ659C4 914 aaKnown RBP12.9□□□□□ -0.34
SND1-208ENST00000470463 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 TBC1D10CQ8IV04 446 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 FAM184AQ8NB25 1140 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 MRIQ9BWK5 157 aa12.9□□□□□ -0.34
SND1-208ENST00000470463 COL11A2P13942 1736 aaPredicted RBP12.89□□□□□ -0.35
SND1-208ENST00000470463 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 CCDC196A0A1B0GTZ2 297 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 CPLX1O14810 134 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 APOBRQ0VD83 1088 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms