RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 OTOP1Q7RTM1 612 aa16.74■□□□□ 0.27
LINC00173-201ENST00000470091 CD99L2Q8TCZ2 262 aa16.74■□□□□ 0.27
LINC00173-201ENST00000470091 SIL1Q9H173 461 aa16.74■□□□□ 0.27
LINC00173-201ENST00000470091 CENPFP49454 3210 aa16.73■□□□□ 0.27
LINC00173-201ENST00000470091 FGFR2P21802 821 aa16.73■□□□□ 0.27
LINC00173-201ENST00000470091 RFX5P48382 616 aaPredicted RBP16.73■□□□□ 0.27
LINC00173-201ENST00000470091 VGLL4Q14135 290 aa16.73■□□□□ 0.27
LINC00173-201ENST00000470091 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
LINC00173-201ENST00000470091 CSADQ9Y600 493 aa16.73■□□□□ 0.27
LINC00173-201ENST00000470091 HTTP42858 3142 aa16.73■□□□□ 0.27
LINC00173-201ENST00000470091 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
LINC00173-201ENST00000470091 PNMA6EA0A0J9YXQ4 647 aa16.72■□□□□ 0.27
LINC00173-201ENST00000470091 HMMRO75330 724 aa16.72■□□□□ 0.27
LINC00173-201ENST00000470091 SLC5A1P13866 664 aa16.72■□□□□ 0.27
LINC00173-201ENST00000470091 APOBEC3HQ6NTF7 200 aaKnown RBP16.72■□□□□ 0.27
LINC00173-201ENST00000470091 OTUD5Q96G74 571 aa16.72■□□□□ 0.27
LINC00173-201ENST00000470091 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
LINC00173-201ENST00000470091 ZDHHC15Q96MV8 337 aa16.72■□□□□ 0.27
LINC00173-201ENST00000470091 CCL15-CCL14A0A0B4J2E2 113 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
LINC00173-201ENST00000470091 ATP8B2P98198 1209 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 SP3Q02447 781 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 CCL15Q16663 113 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
LINC00173-201ENST00000470091 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 LPIN2Q92539 896 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
LINC00173-201ENST00000470091 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 MRIQ9BWK5 157 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 EFCC1Q9HA90 598 aa16.71■□□□□ 0.27
LINC00173-201ENST00000470091 RGS3P49796 1198 aa16.7■□□□□ 0.26
LINC00173-201ENST00000470091 GTF2A2P52657 109 aa16.7■□□□□ 0.26
LINC00173-201ENST00000470091 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
LINC00173-201ENST00000470091 WDR66Q8TBY9 1149 aa16.7■□□□□ 0.26
LINC00173-201ENST00000470091 DCTPP1Q9H773 170 aa16.7■□□□□ 0.26
LINC00173-201ENST00000470091 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
LINC00173-201ENST00000470091 SLC34A2O95436 690 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 NUCB1Q02818 461 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
LINC00173-201ENST00000470091 ATP2B3Q16720 1220 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 HHIPL2Q6UWX4 724 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
LINC00173-201ENST00000470091 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 SUGT1Q9Y2Z0 365 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 MAST3O60307 1309 aa16.69■□□□□ 0.26
LINC00173-201ENST00000470091 CAP1Q01518 475 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 TCP10Q12799 353 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 FAM43AQ8N2R8 423 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 SSH3Q8TE77 659 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 SNCAIPQ9Y6H5 919 aa16.68■□□□□ 0.26
LINC00173-201ENST00000470091 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
LINC00173-201ENST00000470091 PDE4AP27815 886 aa16.67■□□□□ 0.26
LINC00173-201ENST00000470091 POLA2Q14181 598 aa16.67■□□□□ 0.26
LINC00173-201ENST00000470091 ANKRD45Q5TZF3 282 aa16.67■□□□□ 0.26
LINC00173-201ENST00000470091 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
LINC00173-201ENST00000470091 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
LINC00173-201ENST00000470091 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
LINC00173-201ENST00000470091 MKI67P46013 3256 aaKnown RBP16.67■□□□□ 0.26
LINC00173-201ENST00000470091 POTEFA5A3E0 1075 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
LINC00173-201ENST00000470091 PRDX5P30044 214 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 MTX1Q13505 466 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 DCAF15Q66K64 600 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 USP40Q9NVE5 1235 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
LINC00173-201ENST00000470091 KIAA0100Q14667 2235 aaKnown RBP16.65■□□□□ 0.26
LINC00173-201ENST00000470091 APBB1O00213 710 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 IRF6O14896 467 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 CIAO1O76071 339 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
LINC00173-201ENST00000470091 CETPP11597 493 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 ADORA1P30542 326 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 INPP5BP32019 993 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 PHKA1P46020 1223 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 NFIAQ12857 509 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
LINC00173-201ENST00000470091 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
LINC00173-201ENST00000470091 WDHD1O75717 1129 aaPredicted RBP16.64■□□□□ 0.25
LINC00173-201ENST00000470091 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
LINC00173-201ENST00000470091 TIMM10P62072 90 aa16.64■□□□□ 0.25
LINC00173-201ENST00000470091 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
LINC00173-201ENST00000470091 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
LINC00173-201ENST00000470091 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
LINC00173-201ENST00000470091 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
LINC00173-201ENST00000470091 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
LINC00173-201ENST00000470091 ARHGEF6Q15052 776 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms