RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 FBXL16Q8N461 479 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 TCEANC2Q96MN5 208 aa8.1□□□□□ -1.11
GAPVD1-215ENST00000470056 KLF18A0A0U1RQI7 1052 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 TOB2Q14106 344 aaPredicted RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 ESR2Q92731 530 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 KINO60870 393 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 HAND2P61296 217 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 PTPDC1A2A3K4 754 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 DZIP1Q86YF9 867 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 ANGEL1Q9UNK9 670 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 MTMR6Q9Y217 621 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 SLC12A7Q9Y666 1083 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 TJP1Q07157 1748 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 BAG3O95817 575 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 TBC1D9BQ66K14 1250 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 WDR66Q8TBY9 1149 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 PUS7LQ9H0K6 701 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 INCENPQ9NQS7 918 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 METAP2P50579 478 aaKnown RBP eCLIP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 GRAPQ13588 217 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 ZSCAN23Q3MJ62 389 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 AK9Q5TCS8 1911 aa8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 GRAPLQ8TC17 118 aaPredicted RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 ARHGEF1Q92888 912 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 CICQ96RK0 1608 aaPredicted RBP8.09□□□□□ -1.11
GAPVD1-215ENST00000470056 XDHP47989 1333 aa8.09□□□□□ -1.12
GAPVD1-215ENST00000470056 KIAA0754O94854 1291 aa8.09□□□□□ -1.12
GAPVD1-215ENST00000470056 RRP12Q5JTH9 1297 aaKnown RBP8.09□□□□□ -1.12
GAPVD1-215ENST00000470056 USP48Q86UV5 1035 aa8.09□□□□□ -1.12
GAPVD1-215ENST00000470056 C8orf76Q96K31 380 aa8.09□□□□□ -1.12
GAPVD1-215ENST00000470056 TRIM5Q9C035 493 aa8.09□□□□□ -1.12
GAPVD1-215ENST00000470056 ZDHHC9Q9Y397 364 aa8.09□□□□□ -1.12
GAPVD1-215ENST00000470056 BCAMP50895 628 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 TUBB4BP68371 445 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 APOBRQ0VD83 1088 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 PKP1Q13835 747 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 CCAR2Q8N163 923 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 LARP6Q9BRS8 491 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 ONECUT3O60422 494 aaPredicted RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 EXOSC10Q01780 885 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 TMEM67Q5HYA8 995 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 IFNL3Q8IZI9 196 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 DDX19AQ9NUU7 478 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 ELP1O95163 1332 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 GIMAP6Q6P9H5 292 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 OLFM4Q6UX06 510 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 SMARCE1Q969G3 411 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 STRBPQ96SI9 672 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 ZNF804BA4D1E1 1349 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 ITGB4P16144 1822 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 FSD2A1L4K1 749 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 RCAN1P53805 252 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 LRSAM1Q6UWE0 723 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 IQCA1Q86XH1 822 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 LUC7LQ9NQ29 371 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 G3V3G9 751 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 POTEB2H3BUK9 544 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 IFIT3O14879 490 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 MINPP1Q9UNW1 487 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 SCARF1Q14162 830 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 GTPBP4Q9BZE4 634 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 PES1O00541 588 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 ZBTB43O43298 467 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 CALM1P0DP23 149 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 CALM2P0DP24 149 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 CALM3P0DP25 149 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 PLCG2P16885 1265 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 PI16Q6UXB8 463 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 BRAPQ7Z569 592 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 DDX11Q96FC9 970 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 WWC3Q9ULE0 1092 aa8.08□□□□□ -1.12
GAPVD1-215ENST00000470056 PDE4BQ07343 736 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 AKNAD1Q5T1N1 836 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 RASSF8Q8NHQ8 419 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 RBM6P78332 1123 aaKnown RBP8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 ZRSR2Q15696 482 aaKnown RBP8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 BRMS1Q9HCU9 246 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 MB21D2Q8IYB1 491 aaPredicted RBP8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 ARMT1Q9H993 441 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 CNPY2Q9Y2B0 182 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 BBOX1O75936 387 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 LARGE1O95461 756 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 ATP2B4P23634 1241 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 AGXT2Q9BYV1 514 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 WTAPQ15007 396 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 LRRC2Q9BYS8 371 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 ORC3Q9UBD5 711 aaPredicted RBP8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 DACH1Q9UI36 760 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 KAT6BQ8WYB5 2073 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 PDIA3P30101 505 aaKnown RBP8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 UVSSAQ2YD98 709 aa8.07□□□□□ -1.12
GAPVD1-215ENST00000470056 TBC1D22AQ8WUA7 517 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms