RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 TFCP2Q12800 502 aa20.91■□□□□ 0.94
C4A-250ENST00000469975 NFIAQ12857 509 aa20.91■□□□□ 0.94
C4A-250ENST00000469975 CCDC102BQ68D86 513 aa20.91■□□□□ 0.94
C4A-250ENST00000469975 CD99L2Q8TCZ2 262 aa20.91■□□□□ 0.94
C4A-250ENST00000469975 GNL3LQ9NVN8 582 aaKnown RBP20.91■□□□□ 0.94
C4A-250ENST00000469975 HDAC5Q9UQL6 1122 aa20.91■□□□□ 0.94
C4A-250ENST00000469975 TRIM17Q9Y577 477 aa20.91■□□□□ 0.94
C4A-250ENST00000469975 ZSWIM8A7E2V4 1837 aa20.9■□□□□ 0.94
C4A-250ENST00000469975 CCL15-CCL14A0A0B4J2E2 113 aa20.9■□□□□ 0.94
C4A-250ENST00000469975 CCL15Q16663 113 aa20.9■□□□□ 0.94
C4A-250ENST00000469975 FKBP1CQ5VVH2 108 aa20.9■□□□□ 0.94
C4A-250ENST00000469975 OTUD7BQ6GQQ9 843 aa20.9■□□□□ 0.94
C4A-250ENST00000469975 MIER1Q8N108 512 aa20.9■□□□□ 0.94
C4A-250ENST00000469975 DENND2AQ9ULE3 1009 aa20.9■□□□□ 0.94
C4A-250ENST00000469975 RPAP1Q9BWH6 1393 aaPredicted RBP20.89■□□□□ 0.93
C4A-250ENST00000469975 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
C4A-250ENST00000469975 OTOP1Q7RTM1 612 aa20.89■□□□□ 0.93
C4A-250ENST00000469975 ZFPM1Q8IX07 1006 aa20.89■□□□□ 0.93
C4A-250ENST00000469975 USP40Q9NVE5 1235 aa20.89■□□□□ 0.93
C4A-250ENST00000469975 DOCK2Q92608 1830 aa20.89■□□□□ 0.93
C4A-250ENST00000469975 SALL1Q9NSC2 1324 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 A0A1B0GUL7 405 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 SPDYE5A6NIY4 337 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 INPP5BP32019 993 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 RASGRF1Q13972 1273 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 FAM151AQ8WW52 585 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 XAGE2Q96GT9 111 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 FAM198AQ9UFP1 575 aa20.88■□□□□ 0.93
C4A-250ENST00000469975 PNMA6EA0A0J9YXQ4 647 aa20.87■□□□□ 0.93
C4A-250ENST00000469975 IPO8O15397 1037 aaKnown RBP20.87■□□□□ 0.93
C4A-250ENST00000469975 GTF2A2P52657 109 aa20.87■□□□□ 0.93
C4A-250ENST00000469975 MTX1Q13505 466 aa20.87■□□□□ 0.93
C4A-250ENST00000469975 SEMA3EO15041 775 aa20.86■□□□□ 0.93
C4A-250ENST00000469975 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
C4A-250ENST00000469975 TAF1CQ15572 869 aaPredicted RBP20.86■□□□□ 0.93
C4A-250ENST00000469975 DCAF15Q66K64 600 aa20.86■□□□□ 0.93
C4A-250ENST00000469975 TMEM57Q8N5G2 664 aa20.86■□□□□ 0.93
C4A-250ENST00000469975 ZNF341Q9BYN7 854 aa20.86■□□□□ 0.93
C4A-250ENST00000469975 ABCF2Q9UG63 623 aa20.86■□□□□ 0.93
C4A-250ENST00000469975 IRF6O14896 467 aa20.85■□□□□ 0.93
C4A-250ENST00000469975 GNAI2P04899 355 aa20.85■□□□□ 0.93
C4A-250ENST00000469975 SP3Q02447 781 aa20.85■□□□□ 0.93
C4A-250ENST00000469975 ERO1BQ86YB8 467 aa20.85■□□□□ 0.93
C4A-250ENST00000469975 ERO1AQ96HE7 468 aa20.85■□□□□ 0.93
C4A-250ENST00000469975 NEUROD6Q96NK8 337 aa20.85■□□□□ 0.93
C4A-250ENST00000469975 SLURP2P0DP57 97 aa20.84■□□□□ 0.93
C4A-250ENST00000469975 PI16Q6UXB8 463 aa20.84■□□□□ 0.93
C4A-250ENST00000469975 HOOK2Q96ED9 719 aa20.84■□□□□ 0.93
C4A-250ENST00000469975 PDE4DIPQ5VU43 2346 aa20.84■□□□□ 0.93
C4A-250ENST00000469975 HTTP42858 3142 aa20.83■□□□□ 0.93
C4A-250ENST00000469975 BTBD19C9JJ37 291 aa20.83■□□□□ 0.93
C4A-250ENST00000469975 RGS3P49796 1198 aa20.83■□□□□ 0.93
C4A-250ENST00000469975 PPIL2Q13356 520 aa20.83■□□□□ 0.93
C4A-250ENST00000469975 DZIP1Q86YF9 867 aaKnown RBP20.83■□□□□ 0.93
C4A-250ENST00000469975 ZFYVE28Q9HCC9 887 aa20.83■□□□□ 0.93
C4A-250ENST00000469975 AKAP2Q9Y2D5 859 aa20.83■□□□□ 0.93
C4A-250ENST00000469975 GAKO14976 1311 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 CETPP11597 493 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 ZKSCAN2Q63HK3 967 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 SH3BP5LQ7L8J4 393 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 ZNF384Q8TF68 577 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 EFCC1Q9HA90 598 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 ZNF112Q9UJU3 913 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 PTPN22Q9Y2R2 807 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 RFX7Q2KHR2 1363 aa20.82■□□□□ 0.92
C4A-250ENST00000469975 ECM2O94769 699 aaPredicted RBP20.81■□□□□ 0.92
C4A-250ENST00000469975 SNAPC2Q13487 334 aa20.81■□□□□ 0.92
C4A-250ENST00000469975 MVPQ14764 893 aaKnown RBP20.81■□□□□ 0.92
C4A-250ENST00000469975 TBC1D9Q6ZT07 1266 aa20.81■□□□□ 0.92
C4A-250ENST00000469975 ZGPATQ8N5A5 531 aaKnown RBP20.81■□□□□ 0.92
C4A-250ENST00000469975 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.81■□□□□ 0.92
C4A-250ENST00000469975 HMG20BQ9P0W2 317 aa20.81■□□□□ 0.92
C4A-250ENST00000469975 PDS5AQ29RF7 1337 aaKnown RBP20.8■□□□□ 0.92
C4A-250ENST00000469975 MYO5AQ9Y4I1 1855 aaKnown RBP20.8■□□□□ 0.92
C4A-250ENST00000469975 BTDP43251 543 aa20.8■□□□□ 0.92
C4A-250ENST00000469975 ARHGAP39Q9C0H5 1083 aa20.8■□□□□ 0.92
C4A-250ENST00000469975 DDX4Q9NQI0 724 aaKnown RBP20.8■□□□□ 0.92
C4A-250ENST00000469975 ATRNL1Q5VV63 1379 aa20.8■□□□□ 0.92
C4A-250ENST00000469975 ZBTB22O15209 634 aa20.79■□□□□ 0.92
C4A-250ENST00000469975 MECOMQ03112 1051 aa20.79■□□□□ 0.92
C4A-250ENST00000469975 PPATQ06203 517 aa20.79■□□□□ 0.92
C4A-250ENST00000469975 G3BP1Q13283 466 aaKnown RBP eCLIP20.79■□□□□ 0.92
C4A-250ENST00000469975 PICALMQ13492 652 aa20.79■□□□□ 0.92
C4A-250ENST00000469975 GORABQ5T7V8 394 aa20.79■□□□□ 0.92
C4A-250ENST00000469975 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
C4A-250ENST00000469975 IDI2Q9BXS1 227 aa20.79■□□□□ 0.92
C4A-250ENST00000469975 MROH7-TTC4A0A0A0MT08 1334 aa20.78■□□□□ 0.92
C4A-250ENST00000469975 DOCK1Q14185 1865 aa20.78■□□□□ 0.92
C4A-250ENST00000469975 POTEFA5A3E0 1075 aa20.78■□□□□ 0.92
C4A-250ENST00000469975 DDTLA6NHG4 134 aaPredicted RBP20.78■□□□□ 0.92
C4A-250ENST00000469975 WDHD1O75717 1129 aaPredicted RBP20.78■□□□□ 0.92
C4A-250ENST00000469975 RLBP1P12271 317 aa20.78■□□□□ 0.92
C4A-250ENST00000469975 ERICH6Q7L0X2 663 aa20.78■□□□□ 0.92
C4A-250ENST00000469975 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
C4A-250ENST00000469975 SPATA5Q8NB90 893 aa20.78■□□□□ 0.92
C4A-250ENST00000469975 PHIPQ8WWQ0 1821 aa20.78■□□□□ 0.92
C4A-250ENST00000469975 RBBP6Q7Z6E9 1792 aaKnown RBP20.77■□□□□ 0.92
C4A-250ENST00000469975 ENTPD3O75355 529 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms