RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 NOA1Q8NC60 698 aaKnown RBP9.12□□□□□ -0.95
TPM3-215ENST00000469717 BPIFA3Q9BQP9 254 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 FAM204AQ9H8W3 233 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 ABCC6O95255 1503 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 ITSN1Q15811 1721 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 TPM1P09493 284 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 FMR1Q06787 632 aaKnown RBP eCLIP9.11□□□□□ -0.95
TPM3-215ENST00000469717 TFCP2Q12800 502 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 KRT32Q14532 448 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 HSP90AB3PQ58FF7 597 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 MYSM1Q5VVJ2 828 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 JAKMIP3Q5VZ66 844 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 CDC5LQ99459 802 aaKnown RBP9.11□□□□□ -0.95
TPM3-215ENST00000469717 PSD3Q9NYI0 1048 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 L1RE1Q9UN81 338 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 JCADQ9P266 1359 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 AKAP12Q02952 1782 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 GRM8O00222 908 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 GRAMD1CQ8IYS0 662 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 IQUBQ8NA54 791 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 USP6P35125 1406 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 DIP2CQ9Y2E4 1556 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 COBLO75128 1261 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 CASP8Q14790 479 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 TMED8Q6PL24 325 aaPredicted RBP9.11□□□□□ -0.95
TPM3-215ENST00000469717 RAD9BQ6WBX8 426 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
TPM3-215ENST00000469717 KAT2BQ92831 832 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 C8orf76Q96K31 380 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 TEX13AQ9BXU3 409 aaPredicted RBP9.11□□□□□ -0.95
TPM3-215ENST00000469717 GEMIN8Q9NWZ8 242 aaKnown RBP9.11□□□□□ -0.95
TPM3-215ENST00000469717 DENND2AQ9ULE3 1009 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 LAMA4Q16363 1823 aa9.11□□□□□ -0.95
TPM3-215ENST00000469717 A0A1W2PQ27 194 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 A0A1W2PQ64 194 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 A0A1W2PQD8 194 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 E7EWF7 191 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 ZMYND10O75800 440 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 SYKP43405 635 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 SHC4Q6S5L8 630 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 TTC5Q8N0Z6 440 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 GOLGA6L1Q8N7Z2 621 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 SAMSN1Q9NSI8 373 aaKnown RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 PCDHA5Q9Y5H7 936 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 TEX33O43247 280 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 CCP110O43303 1012 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 LIG3P49916 1009 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 ZNF569Q5MCW4 686 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 ZNF530Q6P9A1 599 aaPredicted RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 SRGAP1Q7Z6B7 1085 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 GSPT2Q8IYD1 628 aaKnown RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 MICALL1Q8N3F8 863 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 LLPHQ9BRT6 129 aaKnown RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 C19orf44Q9H6X5 657 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 N4BP2Q86UW6 1770 aaPredicted RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 ZNF335Q9H4Z2 1342 aaPredicted RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 IKBKBO14920 756 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 ATP2B1P20020 1258 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 EXOSC10Q01780 885 aaKnown RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 MCMDC2Q4G0Z9 681 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 NCAPH2Q6IBW4 605 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 NKX2-3Q8TAU0 364 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 LRRC59Q96AG4 307 aaKnown RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 MED15Q96RN5 788 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 POLD4Q9HCU8 107 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 U3KPZ7 1027 aaPredicted RBP9.1□□□□□ -0.95
TPM3-215ENST00000469717 SBNO1A3KN83 1393 aa9.1□□□□□ -0.95
TPM3-215ENST00000469717 GOLIM4O00461 696 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 A1BGP04217 495 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 HOXC9P31274 260 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 CORO7P57737 925 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 ANO1Q5XXA6 986 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 HDXQ7Z353 690 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 C8orf37Q96NL8 207 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 NCAPGQ9BPX3 1015 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.09□□□□□ -0.95
TPM3-215ENST00000469717 YY1AP1Q9H869 796 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 A2ML1A8K2U0 1454 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 BTBD11A6QL63 1104 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 GRIN1Q05586 938 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 CT47A1Q5JQC4 288 aaPredicted RBP9.09□□□□□ -0.95
TPM3-215ENST00000469717 ACRBPQ8NEB7 543 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 NFE2L3Q9Y4A8 694 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 USP31Q70CQ4 1352 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 TUBB4AP04350 444 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 IGKV5-2P06315 115 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 IVLP07476 585 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 TBX2Q13207 712 aaPredicted RBP9.09□□□□□ -0.95
TPM3-215ENST00000469717 BRD3Q15059 726 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 KIF4BQ2VIQ3 1234 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 FBXW10Q5XX13 1052 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 TTC19Q6DKK2 380 aaPredicted RBP9.09□□□□□ -0.95
TPM3-215ENST00000469717 SYNE3Q6ZMZ3 975 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 KCNG4Q8TDN1 519 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 SEC31BQ9NQW1 1179 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 TFR2Q9UP52 801 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 TBX22Q9Y458 520 aa9.09□□□□□ -0.95
TPM3-215ENST00000469717 SPATA31D1Q6ZQQ2 1576 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms