RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 STK3Q13188 491 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 KARSQ15046 597 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 ISM2Q6H9L7 571 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 RPGRIP1Q96KN7 1286 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 FAM210AQ96ND0 272 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 SH3GL3Q99963 347 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 MRPL44Q9H9J2 332 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 TTF2Q9UNY4 1162 aaKnown RBP10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 EMILIN1Q9Y6C2 1016 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 GRIN2DO15399 1336 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 KIDINS220Q9ULH0 1771 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 IRF6O14896 467 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 RTN2O75298 545 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 SKOR1P84550 965 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 ADCY2Q08462 1091 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 OLFM4Q6UX06 510 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 PPP1R42Q7Z4L9 355 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 RUBCNQ92622 972 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 USP44Q9H0E7 712 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 C19orf44Q9H6X5 657 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 KLC4Q9NSK0 619 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 POLR3EQ9NVU0 708 aa10.27□□□□□ -0.77
SMARCE1-207ENST00000469334 MYO5BQ9ULV0 1848 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 EZRP15311 586 aaKnown RBP10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 USP14P54578 494 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 MTX1Q13505 466 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 CEP85LQ5SZL2 805 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 AP1ARQ63HQ0 302 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 NAIF1Q69YI7 327 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 NBPF5PQ86XG9 351 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 ITFG2Q969R8 447 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 VCPKMTQ9H867 229 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 ATP6V0A4Q9HBG4 840 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
SMARCE1-207ENST00000469334 A0A1B0GVL5 298 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 TMEM232C9JQI7 657 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 ZNF202O95125 648 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 PAX7P23759 505 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 STK38Q15208 465 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 USPL1Q5W0Q7 1092 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 CLASRPQ8N2M8 674 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 LINC00301Q8NCQ3 95 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 NSUN7Q8NE18 718 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 ARMC2Q8NEN0 867 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 DDX54Q8TDD1 881 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 SH3GL2Q99962 352 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 FTOQ9C0B1 505 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 SPATS2LQ9NUQ6 558 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 STK26Q9P289 416 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 C3P01024 1663 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 OVOS2A0A0G2JMS6 1433 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 OVOS2A0A0J9YW53 1432 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 NCAPD2Q15021 1401 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 OVOS2Q6IE36 1432 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 SALL1Q9NSC2 1324 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 SRRM3A6NNA2 597 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 MYO1FO00160 1098 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 BIN1O00499 593 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 ALDH1L1O75891 902 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 RASSF9O75901 435 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 CMA1P23946 247 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 CDR1P51861 262 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 GNGT1P63211 74 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 NMIQ13287 307 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 SF3A1Q15459 793 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 ZNF569Q5MCW4 686 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 RASGRP2Q7LDG7 609 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 PDILTQ8N807 584 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 ACTR5Q9H9F9 607 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 CD248Q9HCU0 757 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 BATF3Q9NR55 127 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 INTS13Q9NVM9 706 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 ETAA1Q9NY74 926 aa10.25□□□□□ -0.77
SMARCE1-207ENST00000469334 TSPOAP1O95153 1857 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 GOLGA6L7A0A1B0GV03 622 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 AKR1B15C9JRZ8 316 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 OPA1O60313 960 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 EPB41P11171 864 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 SLC8A1P32418 973 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 GGCXP38435 758 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 CLNS1AP54105 237 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 ACTN3Q08043 901 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 GOLGA8FQ08AF8 430 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 GOLGA8DPQ0D2H9 430 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 TBC1D8BQ0IIM8 1120 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 BRAPQ7Z569 592 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 NEK1Q96PY6 1258 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 PTPDC1A2A3K4 754 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 GOLGA6BA6NDN3 693 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 SPTLC2O15270 562 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 RWDD2BP57060 319 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 394.1 ms