RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ERCC6LQ2NKX8 1250 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 UVSSAQ2YD98 709 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 RPUSD2Q8IZ73 545 aaKnown RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 RPGRQ92834 1020 aaKnown RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 ERO1AQ96HE7 468 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 ARGLU1Q9NWB6 273 aaPredicted RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 MYBL2P10244 700 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 ADCY2Q08462 1091 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 VPS72Q15906 364 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 TSHZ1Q6ZSZ6 1077 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 NLRP10Q86W26 655 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 AMIGO3Q86WK7 504 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 NLRP3Q96P20 1036 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 SRRTQ9BXP5 876 aaKnown RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 FRMD3A2A2Y4 597 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 ELF1P32519 619 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 PEX19P40855 299 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 GYG1P46976 350 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 CTCFLQ8NI51 663 aaPredicted RBP11.42□□□□□ -0.58
NUP50-214ENST00000469163 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
NUP50-214ENST00000469163 ANKRD26Q9UPS8 1709 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 GIGYF2Q6Y7W6 1299 aaKnown RBP11.42□□□□□ -0.58
NUP50-214ENST00000469163 SH3GL3Q99963 347 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 MAP3K15Q6ZN16 1313 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 SASH1O94885 1247 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 ERCC3P19447 782 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 GCKP35557 465 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 LRMPQ12912 555 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 FOXR1Q6PIV2 292 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 CNBD1Q8NA66 436 aa11.42□□□□□ -0.58
NUP50-214ENST00000469163 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
NUP50-214ENST00000469163 DCCP43146 1447 aa11.41□□□□□ -0.58
NUP50-214ENST00000469163 TEX11Q8IYF3 940 aa11.41□□□□□ -0.58
NUP50-214ENST00000469163 MRFAP1L1Q96HT8 127 aa11.41□□□□□ -0.58
NUP50-214ENST00000469163 KIF2AO00139 706 aaPredicted RBP11.41□□□□□ -0.58
NUP50-214ENST00000469163 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
NUP50-214ENST00000469163 TADA2BQ86TJ2 420 aa11.41□□□□□ -0.58
NUP50-214ENST00000469163 CCDC26Q8TAB7 109 aa11.41□□□□□ -0.58
NUP50-214ENST00000469163 PDGFDQ9GZP0 370 aaPredicted RBP11.41□□□□□ -0.58
NUP50-214ENST00000469163 CPDO75976 1380 aa11.41□□□□□ -0.58
NUP50-214ENST00000469163 SLU7O95391 586 aaKnown RBP11.4□□□□□ -0.58
NUP50-214ENST00000469163 HOXB7P09629 217 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 BCAMP50895 628 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 CORO7P57737 925 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 RBBP5Q15291 538 aaKnown RBP11.4□□□□□ -0.58
NUP50-214ENST00000469163 TXNRD1Q16881 649 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 ATL2Q8NHH9 583 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 MINDY4BA8MYZ0 360 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 CCNHP51946 323 aaPredicted RBP11.4□□□□□ -0.58
NUP50-214ENST00000469163 TBC1D8BQ0IIM8 1120 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 SNX1Q13596 522 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 NEDD9Q14511 834 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 CPLX2Q6PUV4 134 aaKnown RBP11.4□□□□□ -0.58
NUP50-214ENST00000469163 ADAM21Q9UKJ8 722 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 ZNF232Q9UNY5 417 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 RGPD2P0DJD1 1756 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 PAX3P23760 479 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 RWDD2BP57060 319 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 TRAF1Q13077 416 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 EZH2Q15910 746 aaKnown RBP11.4□□□□□ -0.58
NUP50-214ENST00000469163 ARHGAP29Q52LW3 1261 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 POTEAQ6S8J7 498 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 TATDN2Q93075 761 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
NUP50-214ENST00000469163 ERLIN2O94905 339 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 ERC1Q8IUD2 1116 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 EFCAB13Q8IY85 973 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 CCDC144CPQ8IYA2 1237 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 JAKMIP1Q96N16 626 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 KIF2CQ99661 725 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 PLEKHA4Q9H4M7 779 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 ZSCAN16Q9H4T2 348 aaPredicted RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 DBNLQ9UJU6 430 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 SMC3Q9UQE7 1217 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 NFAT5O94916 1531 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 PES1O00541 588 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 GLRX3O76003 335 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 LIG3P49916 1009 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 PTPN12Q05209 780 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 SMC1AQ14683 1233 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 ZRSR2Q15696 482 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 TNNI3KQ59H18 835 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 FPGT-TNNI3KV9GXZ4 949 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 SETSIPP0DME0 302 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 PTPN14Q15678 1187 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 SSH3Q8TE77 659 aa11.39□□□□□ -0.59
NUP50-214ENST00000469163 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
NUP50-214ENST00000469163 SEC31AO94979 1220 aaKnown RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 NMIQ13287 307 aaPredicted RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 XAGE2Q96GT9 111 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 OVOS2A0A0G2JMS6 1433 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 LTN1O94822 1766 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms