RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SP8Q8IXZ3 490 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 TMEM87BQ96K49 555 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 NOL10Q9BSC4 688 aaKnown RBP11.01□□□□□ -0.65
SMC1A-205ENST00000469129 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 CRNKL1Q9BZJ0 848 aaKnown RBP11.01□□□□□ -0.65
SMC1A-205ENST00000469129 EPB41L4AQ9HCS5 686 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-205ENST00000469129 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-205ENST00000469129 ZDHHC9Q9Y397 364 aa11.01□□□□□ -0.65
SMC1A-205ENST00000469129 GSG1L2A8MUP6 293 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 F13A1P00488 732 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 LDHBP07195 334 aaKnown RBP11□□□□□ -0.65
SMC1A-205ENST00000469129 PCP11498 1178 aaKnown RBP11□□□□□ -0.65
SMC1A-205ENST00000469129 SYT1P21579 422 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 NT5C2P49902 561 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 EVCP57679 992 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 ST3GAL1Q11201 340 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 MCTP1Q6DN14 999 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 TBC1D10CQ8IV04 446 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 NECAB1Q8N987 351 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 TDRD7Q8NHU6 1098 aaKnown RBP11□□□□□ -0.65
SMC1A-205ENST00000469129 TBC1D22AQ8WUA7 517 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 STAG1Q8WVM7 1258 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 NSUN4Q96CB9 384 aaKnown RBP11□□□□□ -0.65
SMC1A-205ENST00000469129 MASTLQ96GX5 879 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 RIOK1Q9BRS2 568 aaKnown RBP11□□□□□ -0.65
SMC1A-205ENST00000469129 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
SMC1A-205ENST00000469129 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
SMC1A-205ENST00000469129 ATP6V0A2Q9Y487 856 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 SLX4Q8IY92 1834 aa11□□□□□ -0.65
SMC1A-205ENST00000469129 MBD3O95983 291 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 LDHCP07864 332 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 SRGNP10124 158 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 IL1R1P14778 569 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 PTGER2P43116 358 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 MECOMQ03112 1051 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 STK3Q13188 491 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
SMC1A-205ENST00000469129 AKNAD1Q5T1N1 836 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 MFSD6Q6ZSS7 791 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 SLC16A10Q8TF71 515 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 NBPF3Q9H094 633 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 ANAPC4Q9UJX5 808 aa10.99□□□□□ -0.65
SMC1A-205ENST00000469129 ANGEL1Q9UNK9 670 aaKnown RBP10.99□□□□□ -0.65
SMC1A-205ENST00000469129 A0A0G2JLW4 131 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 VPS37CA5D8V6 355 aaPredicted RBP10.98□□□□□ -0.65
SMC1A-205ENST00000469129 GOLGA8BA8MQT2 603 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 SLC3A2P08195 630 aaKnown RBP10.98□□□□□ -0.65
SMC1A-205ENST00000469129 KLHL40Q2TBA0 621 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 LARP1BQ659C4 914 aaKnown RBP10.98□□□□□ -0.65
SMC1A-205ENST00000469129 STYK1Q6J9G0 422 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 TXNRD3Q86VQ6 643 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 AMOTL1Q8IY63 956 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 SMARCC2Q8TAQ2 1214 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 TBC1D16Q8TBP0 767 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 EYA3Q99504 573 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 ATP8A2Q9NTI2 1148 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 ARPP21Q9UBL0 812 aaPredicted RBP10.98□□□□□ -0.65
SMC1A-205ENST00000469129 NAP1L2Q9ULW6 460 aaPredicted RBP10.98□□□□□ -0.65
SMC1A-205ENST00000469129 NEDD4P46934 1319 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 NID2Q14112 1375 aa10.98□□□□□ -0.65
SMC1A-205ENST00000469129 KLF18A0A0U1RQI7 1052 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 ERICH2A1L162 156 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 WTIPA6NIX2 430 aaPredicted RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 SH2B2O14492 632 aaPredicted RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 CDKL5O76039 1030 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 BAG3O95817 575 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 NCLP19338 710 aaKnown RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 PRDX5P30044 214 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 PDIA3P30101 505 aaKnown RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 LIFRP42702 1097 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 ANTXR2P58335 489 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 PPARAQ07869 468 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 SCRN1Q12765 414 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 COL9A3Q14050 684 aaPredicted RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 CPLX2Q6PUV4 134 aaKnown RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 RGS22Q8NE09 1264 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 SGIP1Q9BQI5 828 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 COA1Q9GZY4 146 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 CD209Q9NNX6 404 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 ISY1Q9ULR0 285 aaKnown RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 MTMR6Q9Y217 621 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 DDX49Q9Y6V7 483 aaKnown RBP10.97□□□□□ -0.65
SMC1A-205ENST00000469129 MROH7-TTC4A0A0A0MT08 1334 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 C10orf71Q711Q0 1435 aa10.97□□□□□ -0.65
SMC1A-205ENST00000469129 FAM205AQ6ZU69 1335 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 PTPDC1A2A3K4 754 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 B4E1Z4 1266 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 H0YIN7 160 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 H3BQV1 296 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 CPLX1O14810 134 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 PRKAB2O43741 272 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 PLCG2P16885 1265 aa10.96□□□□□ -0.65
SMC1A-205ENST00000469129 POLD1P28340 1107 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms