RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SHISA5Q8N114 240 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 ATG3Q9NT62 314 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 FAM105AQ9NUU6 356 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 PIM2Q9P1W9 311 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 PNMA6FA0A0J9YX94 578 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 UNCXA6NJT0 531 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 AOC2O75106 756 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 RAB6AP20340 208 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 HOXA10P31260 410 aaPredicted RBP8.62□□□□□ -1.03
LSM5-209ENST00000468872 ENOX2Q16206 610 aaKnown RBP8.62□□□□□ -1.03
LSM5-209ENST00000468872 DTX1Q86Y01 620 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 WDR18Q9BV38 432 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 PRKAG2Q9UGJ0 569 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 AP4E1Q9UPM8 1137 aa8.62□□□□□ -1.03
LSM5-209ENST00000468872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.61□□□□□ -1.03
LSM5-209ENST00000468872 ADAMTS4O75173 837 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 NFICP08651 508 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 ADMP35318 185 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 CPSF6Q16630 551 aaKnown RBP eCLIP8.61□□□□□ -1.03
LSM5-209ENST00000468872 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
LSM5-209ENST00000468872 FBXO33Q7Z6M2 555 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 ZAR1Q86SH2 424 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 OSBPL1AQ9BXW6 950 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 SEMA6CQ9H3T2 930 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 GSX1Q9H4S2 264 aaPredicted RBP8.61□□□□□ -1.03
LSM5-209ENST00000468872 ACSS3Q9H6R3 686 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 LEMD3Q9Y2U8 911 aa8.61□□□□□ -1.03
LSM5-209ENST00000468872 SYNGAP1Q96PV0 1343 aa8.6□□□□□ -1.03
LSM5-209ENST00000468872 ZNF16P17020 682 aaPredicted RBP8.6□□□□□ -1.03
LSM5-209ENST00000468872 ASPAP45381 313 aa8.6□□□□□ -1.03
LSM5-209ENST00000468872 MAP7Q14244 749 aa8.6□□□□□ -1.03
LSM5-209ENST00000468872 GIPC2Q8TF65 315 aa8.6□□□□□ -1.03
LSM5-209ENST00000468872 WDR89Q96FK6 387 aaPredicted RBP8.6□□□□□ -1.03
LSM5-209ENST00000468872 TBC1D32Q96NH3 1257 aa8.6□□□□□ -1.03
LSM5-209ENST00000468872 ZC3H12CQ9C0D7 883 aaKnown RBP8.6□□□□□ -1.03
LSM5-209ENST00000468872 CCDC86Q9H6F5 360 aaKnown RBP8.6□□□□□ -1.03
LSM5-209ENST00000468872 XRCC5P13010 732 aaKnown RBP8.59□□□□□ -1.03
LSM5-209ENST00000468872 GP2P55259 537 aaKnown RBP8.59□□□□□ -1.03
LSM5-209ENST00000468872 TAGLNQ01995 201 aaKnown RBP8.59□□□□□ -1.03
LSM5-209ENST00000468872 NXPE4Q6UWF7 544 aa8.59□□□□□ -1.03
LSM5-209ENST00000468872 GATA6Q92908 595 aa8.59□□□□□ -1.03
LSM5-209ENST00000468872 METTL22Q9BUU2 404 aaPredicted RBP8.59□□□□□ -1.03
LSM5-209ENST00000468872 TMEM39AQ9NV64 488 aa8.59□□□□□ -1.03
LSM5-209ENST00000468872 GPN3Q9UHW5 284 aaPredicted RBP8.59□□□□□ -1.03
LSM5-209ENST00000468872 PPP1R9AQ9ULJ8 1098 aa8.59□□□□□ -1.03
LSM5-209ENST00000468872 GSTP1P09211 210 aaKnown RBP8.58□□□□□ -1.04
LSM5-209ENST00000468872 FOSL1P15407 271 aa8.58□□□□□ -1.04
LSM5-209ENST00000468872 LIG1P18858 919 aa8.58□□□□□ -1.04
LSM5-209ENST00000468872 PPP2R3AQ06190 1150 aa8.58□□□□□ -1.04
LSM5-209ENST00000468872 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
LSM5-209ENST00000468872 FAM170BA6NMN3 283 aa8.57□□□□□ -1.04
LSM5-209ENST00000468872 E9PSI1 815 aa8.57□□□□□ -1.04
LSM5-209ENST00000468872 ZNF862O60290 1169 aa8.57□□□□□ -1.04
LSM5-209ENST00000468872 P4HBP07237 508 aaKnown RBP8.57□□□□□ -1.04
LSM5-209ENST00000468872 FMR1Q06787 632 aaKnown RBP eCLIP8.57□□□□□ -1.04
LSM5-209ENST00000468872 AKAP2Q9Y2D5 859 aa8.57□□□□□ -1.04
LSM5-209ENST00000468872 OAS3Q9Y6K5 1087 aaKnown RBP8.57□□□□□ -1.04
LSM5-209ENST00000468872 TMPRSS2O15393 492 aa8.56□□□□□ -1.04
LSM5-209ENST00000468872 MAPK8P45983 427 aa8.56□□□□□ -1.04
LSM5-209ENST00000468872 MSMPQ1L6U9 139 aa8.56□□□□□ -1.04
LSM5-209ENST00000468872 SEZ6L2Q6UXD5 910 aa8.56□□□□□ -1.04
LSM5-209ENST00000468872 PDZD3Q86UT5 571 aa8.56□□□□□ -1.04
LSM5-209ENST00000468872 CRIM1Q9NZV1 1036 aa8.56□□□□□ -1.04
LSM5-209ENST00000468872 DAGLAQ9Y4D2 1042 aa8.56□□□□□ -1.04
LSM5-209ENST00000468872 DYNC1LI2O43237 492 aaPredicted RBP8.55□□□□□ -1.04
LSM5-209ENST00000468872 WNT11O96014 354 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 SLFN14P0C7P3 912 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 KIF4BQ2VIQ3 1234 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 EAPPQ56P03 285 aaPredicted RBP8.55□□□□□ -1.04
LSM5-209ENST00000468872 C3orf58Q8NDZ4 430 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 STK35Q8TDR2 534 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 FBF1Q8TES7 1133 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 SETDB2Q96T68 719 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 C1GALT1Q9NS00 363 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 KRT82Q9NSB4 513 aa8.55□□□□□ -1.04
LSM5-209ENST00000468872 CYP26A1O43174 497 aa8.54□□□□□ -1.04
LSM5-209ENST00000468872 ID3Q02535 119 aa8.54□□□□□ -1.04
LSM5-209ENST00000468872 MCTP1Q6DN14 999 aa8.54□□□□□ -1.04
LSM5-209ENST00000468872 SULF2Q8IWU5 870 aa8.54□□□□□ -1.04
LSM5-209ENST00000468872 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
LSM5-209ENST00000468872 LGR6Q9HBX8 967 aa8.54□□□□□ -1.04
LSM5-209ENST00000468872 KIAA1522Q9P206 1035 aaPredicted RBP8.54□□□□□ -1.04
LSM5-209ENST00000468872 PCDHGC5Q9Y5F6 944 aa8.54□□□□□ -1.04
LSM5-209ENST00000468872 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
LSM5-209ENST00000468872 CYP27A1Q02318 531 aa8.53□□□□□ -1.04
LSM5-209ENST00000468872 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
LSM5-209ENST00000468872 DUSP27Q5VZP5 1158 aa8.53□□□□□ -1.04
LSM5-209ENST00000468872 ZNF765Q7L2R6 523 aa8.53□□□□□ -1.04
LSM5-209ENST00000468872 KCNB2Q92953 911 aa8.53□□□□□ -1.04
LSM5-209ENST00000468872 MRRFQ96E11 262 aaKnown RBP8.53□□□□□ -1.04
LSM5-209ENST00000468872 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
LSM5-209ENST00000468872 NME2P22392 152 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 ARNTP27540 789 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 GSTT1P30711 240 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 IRAK1P51617 712 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 ALG1LQ6GMV1 187 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 OSBPL7Q9BZF2 842 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms