RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 PI4KAP2A4QPH2 592 aa14.26□□□□□ -0.13
NEDD9-207ENST00000468612 COL9A1P20849 921 aa14.26□□□□□ -0.13
NEDD9-207ENST00000468612 CASP7P55210 303 aa14.26□□□□□ -0.13
NEDD9-207ENST00000468612 GPAT2Q6NUI2 795 aa14.26□□□□□ -0.13
NEDD9-207ENST00000468612 PI4KAP1Q8N8J0 262 aa14.26□□□□□ -0.13
NEDD9-207ENST00000468612 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 CYP2C8P10632 490 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 INPP5BP32019 993 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 CACNB3P54284 484 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 FAM83AQ86UY5 434 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 CCDC146Q8IYE0 955 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 TDRD7Q8NHU6 1098 aaKnown RBP14.25□□□□□ -0.13
NEDD9-207ENST00000468612 HOOK2Q96ED9 719 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.25□□□□□ -0.13
NEDD9-207ENST00000468612 CDH23Q9H251 3354 aa14.25□□□□□ -0.13
NEDD9-207ENST00000468612 ANKRD18BA2A2Z9 1011 aa14.24□□□□□ -0.13
NEDD9-207ENST00000468612 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
NEDD9-207ENST00000468612 NEXNQ0ZGT2 675 aa14.24□□□□□ -0.13
NEDD9-207ENST00000468612 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
NEDD9-207ENST00000468612 ZNF341Q9BYN7 854 aa14.24□□□□□ -0.13
NEDD9-207ENST00000468612 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
NEDD9-207ENST00000468612 ZNF112Q9UJU3 913 aa14.24□□□□□ -0.13
NEDD9-207ENST00000468612 RPAP1Q9BWH6 1393 aaPredicted RBP14.23□□□□□ -0.13
NEDD9-207ENST00000468612 DNAH12Q6ZR08 3092 aa14.23□□□□□ -0.13
NEDD9-207ENST00000468612 HDLBPQ00341 1268 aaKnown RBP14.23□□□□□ -0.13
NEDD9-207ENST00000468612 GRIK5Q16478 980 aa14.23□□□□□ -0.13
NEDD9-207ENST00000468612 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
NEDD9-207ENST00000468612 C11orf49Q9H6J7 331 aa14.23□□□□□ -0.13
NEDD9-207ENST00000468612 TNPO2O14787 897 aaKnown RBP14.22□□□□□ -0.13
NEDD9-207ENST00000468612 GCKRQ14397 625 aa14.22□□□□□ -0.13
NEDD9-207ENST00000468612 CCDC30Q5VVM6 783 aa14.22□□□□□ -0.13
NEDD9-207ENST00000468612 MIGA2Q7L4E1 593 aa14.22□□□□□ -0.13
NEDD9-207ENST00000468612 FAM161BQ96MY7 647 aa14.22□□□□□ -0.13
NEDD9-207ENST00000468612 DDX60LQ5H9U9 1706 aaKnown RBP14.21□□□□□ -0.13
NEDD9-207ENST00000468612 CXCL11O14625 94 aa14.21□□□□□ -0.13
NEDD9-207ENST00000468612 NOL9Q5SY16 702 aaKnown RBP14.21□□□□□ -0.13
NEDD9-207ENST00000468612 C8orf58Q8NAV2 365 aa14.21□□□□□ -0.13
NEDD9-207ENST00000468612 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
NEDD9-207ENST00000468612 DOCK3Q8IZD9 2030 aa14.2□□□□□ -0.14
NEDD9-207ENST00000468612 PFASO15067 1338 aa14.2□□□□□ -0.14
NEDD9-207ENST00000468612 MAFAQ8NHW3 353 aaPredicted RBP14.2□□□□□ -0.14
NEDD9-207ENST00000468612 CCER1Q8TC90 406 aaPredicted RBP14.2□□□□□ -0.14
NEDD9-207ENST00000468612 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
NEDD9-207ENST00000468612 TMOD2Q9NZR1 351 aa14.2□□□□□ -0.14
NEDD9-207ENST00000468612 OGDHLQ9ULD0 1010 aa14.2□□□□□ -0.14
NEDD9-207ENST00000468612 HMGCRP04035 888 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 HIBADHP31937 336 aaKnown RBP14.19□□□□□ -0.14
NEDD9-207ENST00000468612 GYG1P46976 350 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 IFIT5Q13325 482 aaKnown RBP14.19□□□□□ -0.14
NEDD9-207ENST00000468612 ZNF697Q5TEC3 545 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 APOBEC3HQ6NTF7 200 aaKnown RBP14.19□□□□□ -0.14
NEDD9-207ENST00000468612 SYMPKQ92797 1274 aaKnown RBP14.19□□□□□ -0.14
NEDD9-207ENST00000468612 TEKT1Q969V4 418 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 FAM84BQ96KN1 310 aaPredicted RBP14.19□□□□□ -0.14
NEDD9-207ENST00000468612 CDX2Q99626 313 aaPredicted RBP14.19□□□□□ -0.14
NEDD9-207ENST00000468612 MRIQ9BWK5 157 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 CHMP4AQ9BY43 222 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 IFT57Q9NWB7 429 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 RAPGEFL1Q9UHV5 662 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 TAOK2Q9UL54 1235 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 SLC45A1Q9Y2W3 748 aa14.19□□□□□ -0.14
NEDD9-207ENST00000468612 A0A0G2JLL6 359 aaPredicted RBP14.18□□□□□ -0.14
NEDD9-207ENST00000468612 PLIN1O60240 522 aa14.18□□□□□ -0.14
NEDD9-207ENST00000468612 FOXO4P98177 505 aa14.18□□□□□ -0.14
NEDD9-207ENST00000468612 MDM2Q00987 491 aaPredicted RBP14.18□□□□□ -0.14
NEDD9-207ENST00000468612 PRRT2Q7Z6L0 340 aaPredicted RBP14.18□□□□□ -0.14
NEDD9-207ENST00000468612 COA7Q96BR5 231 aa14.18□□□□□ -0.14
NEDD9-207ENST00000468612 COL6A1P12109 1028 aa14.17□□□□□ -0.14
NEDD9-207ENST00000468612 PLA2G5P39877 138 aa14.17□□□□□ -0.14
NEDD9-207ENST00000468612 GNAI1P63096 354 aa14.17□□□□□ -0.14
NEDD9-207ENST00000468612 TRIM32Q13049 653 aa14.17□□□□□ -0.14
NEDD9-207ENST00000468612 UBE4AQ14139 1066 aa14.17□□□□□ -0.14
NEDD9-207ENST00000468612 FASTKD5Q7L8L6 764 aaKnown RBP14.17□□□□□ -0.14
NEDD9-207ENST00000468612 HMX1Q9NP08 348 aaPredicted RBP14.17□□□□□ -0.14
NEDD9-207ENST00000468612 LDHAL6AQ6ZMR3 332 aa14.16□□□□□ -0.14
NEDD9-207ENST00000468612 TSPYL6Q8N831 410 aa14.16□□□□□ -0.14
NEDD9-207ENST00000468612 FAM151AQ8WW52 585 aa14.16□□□□□ -0.14
NEDD9-207ENST00000468612 ZNF594Q96JF6 807 aaPredicted RBP14.16□□□□□ -0.14
NEDD9-207ENST00000468612 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
NEDD9-207ENST00000468612 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
NEDD9-207ENST00000468612 G2E3Q7L622 706 aa14.15□□□□□ -0.14
NEDD9-207ENST00000468612 TBC1D22AQ8WUA7 517 aa14.15□□□□□ -0.14
NEDD9-207ENST00000468612 SEMA6BQ9H3T3 888 aa14.15□□□□□ -0.14
NEDD9-207ENST00000468612 GJD2Q9UKL4 321 aa14.15□□□□□ -0.14
NEDD9-207ENST00000468612 TNFRSF10AO00220 468 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 CHAF1AQ13111 956 aaPredicted RBP14.14□□□□□ -0.15
NEDD9-207ENST00000468612 FAM110CQ1W6H9 321 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 HHIPL2Q6UWX4 724 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 GADL1Q6ZQY3 521 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 FBXO33Q7Z6M2 555 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 ANKRD13CQ8N6S4 541 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 SMCR8Q8TEV9 937 aaPredicted RBP14.14□□□□□ -0.15
NEDD9-207ENST00000468612 CNNM1Q9NRU3 951 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 CHMP3Q9Y3E7 222 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 AFG3L2Q9Y4W6 797 aa14.14□□□□□ -0.15
NEDD9-207ENST00000468612 PHF20L1A8MW92 1017 aa14.13□□□□□ -0.15
NEDD9-207ENST00000468612 PTPRAP18433 802 aa14.13□□□□□ -0.15
NEDD9-207ENST00000468612 MAP3K21Q5TCX8 1036 aa14.13□□□□□ -0.15
NEDD9-207ENST00000468612 LINS1Q8NG48 757 aa14.13□□□□□ -0.15
NEDD9-207ENST00000468612 MYLIPQ8WY64 445 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms